Files in isglobal-brge/snpfier
Get inversion status in predefined regions
.Rbuildignore
.gitattributes
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/Refs.R
R/SNPsR2.R
R/checkSNPs.R
R/classifSNPs.R
R/classifSNPsImputation.R
R/correctAlleleTable.R
R/getAlleleTable.R
R/getGenotypesTable.R
R/getInvStatus.R
R/hetRefs.R
R/info.R
R/inversionGR.R
R/scoreInvHap-package.R
R/scoreInvHap.R
R/scoreInvHapRes_class.R
data/Refs.rda
data/SNPsR2.rda
data/hetRefs.rda
data/info.rda
data/inversionGR.rda
inst/extdata/example.vcf
inst/scripts/checkSNPs.R
inst/scripts/createGenomicRanges.R
man/Refs.Rd
man/SNPsR2.Rd
man/adaptRefs.Rd
man/checkSNPs.Rd
man/classifSNPs.Rd
man/computeScore.Rd
man/correctAlleleTable.Rd
man/getAlleleTable.Rd
man/getGenotypesTable.Rd
man/getInvStatus.Rd
man/hetRefs.Rd
man/info.Rd
man/inversionGR.Rd
man/prepareMap.Rd
man/scoreInvHap.Rd
man/scoreInvHapRes-class.Rd
readme.md
scoreInvHap.Rproj
tests/testthat.R
tests/testthat/test_01_AlleleTable.R
tests/testthat/test_02_scoreInvHap.R
vignettes/scoreInvHap.Rmd
vignettes/scoreInvHap.html
