rqt-class: The rqt class

In izhbannikov/rqt: rqt: utilities for gene-level meta-analysis

The rqt class

Description

This class stores parameters and results of the rtq algorithms

Value

None

Slots

phenotype:

Phenotype (a vector of length N, where N - number of individuals).

genotype:

Genotype - an object of class SummarizedExperiment. Should contain one assay (matrix, N by M where N - number of individuals, M - number of genetic variants).

covariates:

data frame N by K where N - number of individuals, K - number of covariates)

results:

A list of two: test statistics (Q1, Q2, Q3), p-values (p1.Q1, p2.Q2, p3.Q3)

izhbannikov/rqt documentation built on Aug. 2, 2024, 1:39 p.m.