Description Usage Arguments Author(s)
Create volcano plots from a list of DESeq2 Results objects
1 2 3 4 5 6 7 8 9 | PlotRNAVolcanoes(
res.list,
dds,
outpath,
padj.thresh,
fc.thresh,
n.labels = 10,
use.labels = TRUE
)
|
res.list |
Named List containing DESeqResults objects for
all comparisons generated by |
dds |
A DESeqDataSet object as returned by
|
outpath |
Path to directory to be used for output. |
padj.thresh |
Number indicating the adjusted p-value cutoff to be used for determining "significant" differential expression. |
fc.thresh |
Number indicating the log2 fold-change cutoff to be used for determining "significant" differential expression. |
n.labels |
Number of genes to label on the volcano plot, ranked by adjusted p-value. |
use.labels |
Boolean indicating whether labels should be added to plot. |
Jared Andrews
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.