plot_heatmap: Plot a heatmap of genes across cell clusters

Description Usage Arguments Examples

View source: R/plotting.R

Description

Use this to visualise gene expression in a heatmap across clusters. This will give you expression of certain genes across clusters averaged over all conditions i.e. you can't specify to split by disease

Usage

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plot_heatmap(dataset, genes)

Arguments

dataset

Seurat object that you want to get expression from

genes

The genes you want to plot

Examples

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## Not run: 
plot_heatmap(dataset = seurat_object,
             genes = c("IFNG", "IL10", "FOXP3", "CD69", "CD8A"))

## End(Not run)

jackbibby1/scExpression documentation built on Dec. 20, 2021, 8:05 p.m.