Files in jae0/stmdat
Package that interacts with stmv.
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/Astar_8dir.R
R/Astar_8dir_fast.R
R/Extract_BioChem_Data.R
R/PL_Abs2SqMeter.R
R/Process_PL_Data_Level1.R
R/Read_SQL.R
R/adjust.inflation.r
R/aegis_db.R
R/aegis_db_extract.R
R/aegis_db_extract_by_polygon.R
R/aegis_db_lookup.R
R/aegis_db_map.R
R/aegis_db_spatial_object.R
R/aegis_lookup.R
R/aegis_lookup_mapparams.R
R/aegis_map.R
R/aegis_map_xyz.R
R/aegis_modelformula.R
R/aegis_parameters.r
R/aegis_prediction_surface.R
R/aegis_stmv.R
R/aegis_ts_db.R
R/aisMetropolisHastingsNaive.r
R/aisNaive.r
R/applyMean.r
R/applySD.r
R/applySum.r
R/applySummary.R
R/area_lines.db.R
R/areal_units.R
R/bathymetry.db.r
R/bathymetry.figures.r
R/bathymetry.lookup.r
R/bins.df.r
R/bio.blue.r
R/biochem.db.r
R/blue.red.r
R/bottles.db.r
R/boundingbox.R
R/cl.batch.process.R
R/cl.get.data.R
R/coastline.db.R
R/coastline_layout.R
R/color.code.r
R/colour.scale.r
R/compute.calibration.estimates.between.surveys.r
R/compute.oxygen.saturation.r
R/concave.hull.r
R/condition.db.r
R/convert.degdec2degmin.r
R/convert.degmin2degdec.r
R/cover.r
R/createChart.R
R/cumsum.jae.r
R/decibar2depth.r
R/explicit.to.implicit.2d.line.r
R/figure.bio.map.survey.locations.r
R/figure.mpa.aoi.r
R/figure.mpa.closeup.r
R/figure.trawl.density.r
R/filter.season.r
R/filter_data.R
R/findFValue_8dir.R
R/form.bins.r
R/geo_subset.R
R/geocode.r
R/geodist.r
R/get.Musquash.r
R/get.ocmd.areas.r
R/great.circle.distance.r
R/great.circle.distance.vector.vector.r
R/green.red.r
R/grid_internal.R
R/grid_lonlat.R
R/groundfish.db.r
R/groundfish.variablelist.R
R/initializeField.R
R/interval_break.R
R/isobath.db.r
R/landings.db.r
R/landmask.r
R/line.intersection.2d.r
R/lonlat.change.res.r
R/lonlat2planar.r
R/lookup.projection.params.r
R/marfissci.batch.process.R
R/marfissci.get.data.R
R/marfissci.process.data.R
R/marfissci.simple.map.r
R/maritimes_groundfish_strata.R
R/maritimes_groundfish_strata_identify.R
R/meanweights_by_strata.R
R/metabolic.rates.r
R/metabolism.db.r
R/mpa.db.r
R/nb2edge.R
R/nb_add.R
R/nb_remove.R
R/nearest.sorted.angles.r
R/neighbourhood_structure.R
R/netmensuration.R
R/netmensuration.figures.R
R/netmensuration.marport.R
R/netmensuration.parameters.local.overrides.r
R/netmensuration.scanmar.R
R/osd.data.r
R/panel.levelplot.r
R/parse.odf.file.r
R/parse.odf.parameter.header.r
R/pca.analyse.data.r
R/pca.modified.r
R/planar2lonlat.r
R/plot.ordination.r
R/points_to_grid.R
R/points_to_polygons.R
R/polygon.db.r
R/polygon_5kmoffcoast.R
R/polygon_file.r
R/polygon_inside.R
R/polygon_internal_code.R
R/polygons_managementarea.R
R/presence.absence.r
R/pressure2Depth.r
R/quantile_estimate.r
R/quantile_to_normal.r
R/raster_to_spatialpolygon.R
R/rbg2bgr.r
R/reformat_to_matrix.R
R/remote.sensing.db.r
R/rename.variables.r
R/shannon.diversity.r
R/sizespectrum.db.r
R/spatial_data_openstreetmap.R
R/spatial_grid.R
R/spatial_parameters.R
R/spatial_warp.R
R/spatialpolygon_to_raster.R
R/speciesarea.db.r
R/speciescomposition.db.r
R/strata_definitions.R
R/substrate.db.r
R/substrate.figures.R
R/survey.db.r
R/temperature.db.r
R/temperature.lookup.r
R/temperature.map.r
R/tessellate.R
R/test.intersection.r
R/topo.colors2.r
R/vessel_findWayBack.R
R/vincenty.r
R/xtab.2way.r
R/xy2SpatialPolygon.r
R/zoop.db.r
README.md
data/ess.data.rdata
inst/README.md
inst/scripts/00.surveys_rawdata.r
inst/scripts/01.bathymetry.R
inst/scripts/02.coastline.R
inst/scripts/03.polygons.r
inst/scripts/04.substrate.R
inst/scripts/05.temperature.R
inst/scripts/10.surveys.r
inst/scripts/11.condition.R
inst/scripts/11.metabolism.R
inst/scripts/11.sizespectrum.R
inst/scripts/11.speciesarea.R
inst/scripts/11.speciescomposition.R
inst/scripts/20.lookuptables.r
inst/scripts/21.mpa.r
inst/scripts/30.aegis.timeseries.r
inst/scripts/99.05.biochem.R
inst/scripts/99.06.remote.sensing.r
inst/scripts/99.example.sorted.ordination.r
inst/scripts/99.idw.gam.maps.r
inst/scripts/99.load.ctd.data.R
inst/scripts/99.moored.R
inst/scripts/99.test.speciescomposition.r
inst/sql/MAR_PL_Data_Counts.sql
inst/sql/MAR_PL_SampleID.sql
vignettes/example.Rmd
