sir_22: Two age/two titre class SIR ODE function
In jameshay218/episize: Epidemic Final Size Calculator
Description
Usage
Arguments
Value
See Also
Description
Calculates the final size of an epidemic given 2-dimensional population categorisation eg. age and immunity class using an SIR model. Only takes 2 ages and 2 titres.
Usage
1
Arguments
t
current time, as for ode function
pars
vector of R0, alpha1, alpha2 (immunity of titre class 1 and 2) and duration of infectious period
C
the contact rate matrix for contact rates between each age/titre class (4x4 matrix)
vector
of compartment sizes ie. S11, I11, R11, S12 etc...
Value
a list of compartment size changes, as required by deSolve
See Also
jameshay218/episize documentation built on May 18, 2019, 11:20 a.m.
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Description Usage Arguments Value See Also
Description
Calculates the final size of an epidemic given 2-dimensional population categorisation eg. age and immunity class using an SIR model. Only takes 2 ages and 2 titres.
Usage
1 |
Arguments
t |
current time, as for ode function |
pars |
vector of R0, alpha1, alpha2 (immunity of titre class 1 and 2) and duration of infectious period |
C |
the contact rate matrix for contact rates between each age/titre class (4x4 matrix) |
vector |
of compartment sizes ie. S11, I11, R11, S12 etc... |
Value
a list of compartment size changes, as required by deSolve
See Also
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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