API for jameshay218/mcmcJH
Generic random walk MCMC algorithm for parameter inference
| Global functions | |
|---|---|
| MCMC_fit_1.1 | Man page Source code Source code |
| MCMC_fit_1.2 | Man page Source code |
| MCMC_fit_single | Man page Source code Source code |
| MCMC_main | Man page Source code Source code |
| MCMC_main_checks | Source code |
| combine_numbers | Source code |
| condense.data | Man page Source code |
| condense.data.simple | Man page Source code |
| consolidate_data | Source code |
| create_polygons | Man page Source code |
| create_sample_distribution | Source code |
| dRF_prior_norm | Source code |
| data_check | Source code |
| f | Source code |
| fnProposeParamUpdatesSingle | Source code |
| fromUnitScale1 | Man page Source code |
| generate_artificial_data | Source code |
| generate_artificial_data_big | Source code |
| generate_observation_error_matrix | Source code |
| generate_prediction_intervals_1.1 | Man page Source code |
| generate_prediction_intervals_1.2 | Man page Source code |
| generate_prior_data | Man page Source code |
| generate_sample | Source code |
| likelihood_complex | Source code |
| likelihood_norm | Man page Source code |
| likelihood_observation | Man page Source code |
| likelihood_poisson | Man page Source code |
| likelihood_simple | Source code |
| load_param_table | Man page Source code |
| logistic | Man page Source code |
| logit | Man page Source code |
| m_prior_norm | Source code |
| mcmc_all_plots_multi | Man page Source code |
| mcmc_all_plots_single | Man page Source code |
| mcmc_density_multi | Man page Source code |
| mcmc_density_single | Man page Source code |
| mcmc_diagnostics | Man page Source code |
| mcmc_iter_multi | Man page Source code |
| mcmc_iter_single | Man page Source code |
| mcmc_param_check | Man page Source code |
| mu_prior_norm | Source code |
| no_prior | Source code |
| o | Source code |
| observation_model_kucharski | Source code |
| optifix | Man page Source code |
| pad_lists | Man page Source code |
| param_check | Man page Source code |
| plot_model_fits | Man page Source code |
| posterior1 | Man page Source code |
| predict.titre.OLD | Man page Source code |
| predict.titre.fast | Man page Source code |
| predict.titre.fast.bounded | Man page Source code |
| predict_titre_universal_m | Man page Source code |
| predict_titre_universal_m_2 | Man page Source code |
| prior | Man page Source code |
| prior_wrapper | Man page Source code |
| proposalfunction1 | Man page Source code |
| psi.A2.sim.fit.params | Source code |
| rand.params | Man page Source code |
| read_chain_list | Source code |
| remove_zero_data | Man page Source code |
| restrain_bounds | Man page Source code |
| run_metropolis_MCMC | Man page Source code |
| scaletuning1 | Man page Source code |
| sigma_prior_norm | Source code |
| simple_mcmc_plots | Source code |
| titre_model | Man page Source code |
| toUnitScale1 | Man page Source code |
| tp_prior_norm | Source code |
| tp_prior_norm2 | Source code |
| transform_logistic | Man page Source code |
| transform_logit | Man page Source code |
| transform_params_logistic | Man page Source code |
| transform_params_logisticOLD | Man page Source code |
| transform_params_logit | Man page Source code |
| transform_params_logitOLD | Man page Source code |
| ts_prior_norm | Source code |
| ts_prior_norm2 | Source code |
