Description Usage Arguments Value
View source: R/vax_alloc_funcs.R
allocate vaccines according to absolute incidence in each location, then allocate uniformly within each country (without discriminating between ages/risk groups/infection statuses)
1 2 | vaccinate_by_incidence(sum_age_risk_func, travel_matrix,
vax_allocation_params, S, E, I, R, SV, EV, IV, RV, incidence, vax_pool)
|
sum_age_risk_func |
a function which sums a vector across age and risk groups (created automatically in the code) |
travel_matrix |
a square matrix with side length n_countries. Travel_matrix[x,y] is the proportion of time an individual in location x spends in location y |
vax_allocation_params |
list of parameters for vaccine allocation |
S |
numeric vector of length n. number of unvaccinated susceptibles. n is number of locations * number of age groups * number of risk groups |
E |
numeric vector of length n. number of unvaccinated exposed |
I |
numeric vector of length n. number of unvaccinated infectious |
R |
numeric vector of length n. number of unvaccinated recovered |
SV |
numeric vector of length n. number of vaccinated susceptibles. |
EV |
numeric vector of length n. number of vaccinated exposed |
IV |
numeric vector of length n. number of vaccinated infectious |
RV |
numeric vector of length n. number of vaccinated recovered |
incidence |
numeric vector of length n. incidence |
vax_pool |
numeric vector of length 1. number of vaccines available |
n_vax_allocated numeric vector of length n_countries. number of vaccines allocated to each country
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