myloo: leave one out cross-validation with additional functions

Description Usage Arguments Details

View source: R/myloo.R

Description

leave one out cross-validation with additional functions

Usage

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myloo(rg, grouping_var = NULL, secondary_model = FALSE, nvar = 20,
  balancing = TRUE, mask = NULL, bestsample_sel = FALSE,
  response = "GROUP")

Arguments

rg

EList object from limma

grouping_var

grouping variable

secondary_model

whether secondary model should be calculated

nvar

number of variables for the secondary model

balancing

whether sets should be balanced

mask

additional mask

bestsample_sel

choose only samples which were predicted correctly for prediction of the unknown sample

response

name of the response variable

Details

leave one out cross-validation with additional functions


january3/myfuncs documentation built on April 1, 2020, 4:42 a.m.