featureSummary: Summarise features

Description Usage Arguments Value Examples

Description

Summarise spectrally binned features.

Usage

1
2
3
4
5
6
7
featureSummary(x)

## S4 method for signature 'Binalysis'
featureSummary(x)

## S4 method for signature 'MetaboProfile'
featureSummary(x)

Arguments

x

S4 object of class Binalysis

Value

A tibble containing feature summaries

Examples

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
11
## Retrieve file paths and sample information for example data
files <- metaboData::filePaths('FIE-HRMS','BdistachyonEcotypes')[1:2]

info <- metaboData::runinfo('FIE-HRMS','BdistachyonEcotypes')[1:2,]

## Perform spectral binning
analysis <- binneR::binneRlyse(files, 
                               info, 
                               parameters = binneR::detectParameters(files))

featureSummary(analysis)

jasenfinch/metaboMisc documentation built on Feb. 10, 2022, 4:22 p.m.