metaboMisc: Miscellaneous Functions for Metabolomics Analyses

featureSummary

R Documentation

Summarise `m/z` features

Description

Summarise spectrally processed m/z features.

Usage

featureSummary(x)

## S4 method for signature 'Binalysis'
featureSummary(x)

## S4 method for signature 'MetaboProfile'
featureSummary(x)

Arguments

`x`	an object of S4 class `Binalysis` or `MetaboProfile`

Value

A tibble containing feature summaries.

Examples

## Retrieve file paths and sample information for example data
files <- metaboData::filePaths('FIE-HRMS','BdistachyonEcotypes')[1:2]

info <- metaboData::runinfo('FIE-HRMS','BdistachyonEcotypes')[1:2,]

## Perform spectral binning
analysis <- binneR::binneRlyse(files, 
                               info, 
                               parameters = binneR::detectParameters(files))

featureSummary(analysis)

jasenfinch/metaboMisc documentation built on July 31, 2023, 2:28 a.m.