Fit RIVPACS type models and calculate metrics from RIVPACS predictions

biodiversity | Create a biodiversity data object |

buildRIVPACS | Build a RIVPACS model |

calculateExpected | Calculate the expected number of species at a site based on a... |

calculateNullExpected | Calculate the expected number of species from a null model. |

calculateOccurrenceProb | Probability of occurrence for each species in each group |

calculateRIVPACSMetrics | Calculate RIVPACS metrics |

castSampleData | Create a sample by taxa matrix from data in long format |

matchTaxa | Make the taxa in two different sample * taxa matrices match |

predict.rivpacs | Use a RIVPACS model to calculate metrics |

predictRIVPACS | Use a RIVPACS model to calculate metrics |

predictSiteGroup | Posterior probability of group membership |

rarify | Subsample samples of organisms to a fixed count |

Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.