API for jasonelaw/RIVPACS
Fit RIVPACS type models and calculate metrics from RIVPACS predictions

Global functions
biodiversity Man page Source code
buildRIVPACS Man page Source code
calculateExpected Man page Source code
calculateNullExpected Man page Source code
calculateOccurrenceProb Man page Source code
calculateRIVPACSMetrics Man page Source code
castSampleData Man page Source code
clusterTaxa Source code
collapseTaxa Source code
getCalibrationData Man page Source code
getCalibrationData.rivpacs Man page Source code
getCalibrationGroups Man page Source code
getCalibrationGroups.rivpacs Man page Source code
getCalibrationVars Man page Source code
getCalibrationVars.rivpacs Man page Source code
getFormula Man page Source code
getFormula.rivpacs Man page Source code
getGroupInvCov Man page Source code
getGroupInvCov.rivpacs Man page Source code
getGroupMeans Man page Source code
getGroupMeans.rivpacs Man page Source code
getModel Man page Source code
getModel.rivpacs Man page Source code
getPhylo4 Source code
getPhylo4.biodiversity Man page Source code
getSamples Source code
getSamples.biodiversity Man page Source code
getSamples.rivpacs Man page Source code
getSites Source code
getSites.biodiversity Man page Source code
getSites.rivpacs Man page Source code
getTraits Source code
getTraits.biodiversity Man page Source code
matchTaxa Man page Source code
pooledCovariance Source code
predict.rivpacs Man page Source code
predictRIVPACS Man page
predictSiteGroup Man page Source code
print.biodiversity Man page Source code
rarify Man page Source code
removeIntercept Source code
responseToRownames Source code
selectLDA Source code
jasonelaw/RIVPACS documentation built on May 18, 2019, 4:53 p.m.