Description Usage Arguments Value
The main function for simulation studies assessing our
generating function approach in the the discretely
observed simple birth-shift-death-process without
covariates. Generates synthetic datasets using
makedata.simple
, and infers the MLE rates
for each using FFT.optim
.
1 2 | FFT.run(N, tList, lam, v, mu, initList, initGuess,
s1.seq, s2.seq)
|
N |
An integer specifying the number of observation intervals/realization from the simple BSD process. |
tList |
A list of observation interval lengths. The number of datasets returned is equal to the length of tList |
lam |
Per-particle birth rate |
v |
Per-particle shift rate |
mu |
Per-particle death rate |
initList |
A vector containing possible initial population sizes |
initGuess |
A vector containing the initial guess of birth, shift, and death rates |
s1.seq |
A vector of complex arguments evenly spaced along the unit circle |
s2.seq |
A vector of complex arguments evenly spaced along the unit circle |
A list of optim objects
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