makedata.simple: Generate synthetic dataset for BSD process with simple rates

In jasonxu90/bdsem: Analysis of discretely observed Birth-Death-Shift processes

Description

makedata.simple creates a list of synthetic observed datasets, each with N observation intervals from the BSD process. Observation interval lengths are entries in tList. This is used in simulation studies checking inferential procedures. Simulates observations using ransim.N.true.

Usage

  makedata.simple(N, tList, lam, v, mu, initList)

Arguments

N	An integer specifying the number of observation intervals/realization from the simple BSD process.
tList	A list of observation interval lengths. The number of datasets returned is equal to the length of tList
lam	Per-particle birth rate
v	Per-particle shift rate
mu	Per-particle death rate
initList	A vector containing possible initial population sizes

Value

A list of matrices. Each entry in the list is in the format returned by ransim.N.true, and corresponds to equal observation times specified in the corresponding entry in tList

Examples

makedata.simple(30,c(.2,.4,.6),.2,.12,.15,seq(8,12))

jasonxu90/bdsem documentation built on May 18, 2019, 5:54 p.m.