volcanoPlot: VolcanoPlot
In jaspershen/MetFlow: Comprehensitive tools for metabolomics data processing and data analysis.
Description
Usage
Arguments
Value
Author(s)
Description
Draw volcano plot.
Usage
1
2
volcanoPlot(p.value, fc, p.cutoff = 0.05, fc.cutoff = 1.3,
xlab = "Log2 (Fold change)", ylab = "-Log10 (P-value)")
Arguments
p.cutoff
p value cutoff.
MetFlowData
MetFlowData.
x
x axis factor.
y
y axis factor.
z
z axis factor.
col
Colour for markers and non-markers.
foldchange.cutoff
Fold chagne cutoff.
vip.cutoff
VIP value cutoff.
path
The directory you want to write results.
Value
volcano plot.
Author(s)
Xiaotao Shen
shenxt@sioc.ac.cn
jaspershen/MetFlow documentation built on Aug. 1, 2019, 4:36 p.m.
R Package Documentation
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Description Usage Arguments Value Author(s)
Description
Draw volcano plot.
Usage
1 2 | volcanoPlot(p.value, fc, p.cutoff = 0.05, fc.cutoff = 1.3,
xlab = "Log2 (Fold change)", ylab = "-Log10 (P-value)")
|
Arguments
p.cutoff |
p value cutoff. |
MetFlowData |
MetFlowData. |
x |
x axis factor. |
y |
y axis factor. |
z |
z axis factor. |
col |
Colour for markers and non-markers. |
foldchange.cutoff |
Fold chagne cutoff. |
vip.cutoff |
VIP value cutoff. |
path |
The directory you want to write results. |
Value
volcano plot.
Author(s)
Xiaotao Shen shenxt@sioc.ac.cn
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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