In jaspershen/metflow2: Comprehensitive tools for metabolomics data processing and data analysis

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  # fig.width = 7, 
  # fig.height = 5,
  warning = FALSE,
  message = TRUE,
  fig.path = "man/figures/"
)

library("badger")

metflow2

cat(
    badge_cran_release("metflow2", "green"),
    badge_code_size(ref = "jaspershen/metflow2"),
    badge_dependencies(),
    badge_lifecycle()
    # badge_cran_download("badger", "grand-total", "green"),
    # badge_cran_download("badger", "last-month", "green"),
    # badge_cran_download("badger", "last-week", "green")
)

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About

metflow2 is a R package which is used for untargeted metabolomics data processing and analysis.

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Installation

You can install metflow2 from Github.

# Install `metflow2` from GitHub
if(!require(devtools)){
install.packages("devtools")
}
devtools::install_github("jaspershen/metflow2")

We use the demo data in demoData package to show how to use metflow2. Please install it first.

devtools::install_github("jaspershen/demoData")

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Usage

Please see the Get started page to get the instrduction of metflow2.

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Need help?

If you have any quesitions about metflow2, please don’t hesitate to email me ([e-mail]).

shenzutao1990

[e-mail]

Twitter

M339, Alway building, Cooper Lane, Palo Alto, CA 94304

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Citation

If you use metflow2 in you publication, please cite this publication:

X Shen, ZJ Zhu - Bioinformatics (Oxford, England), 2019, MetFlow: An interactive and integrated workflow for metabolomics data cleaning and differential metabolite discovery.
Web Link.

Thanks very much!

jaspershen/metflow2 documentation built on Aug. 15, 2021, 4:38 p.m.