marker_heatJF: Marker heat plot for Joes Flow

In jcooperdevlin/JoesFlow: Joes Flow simplified analysis for single cell modality data

Marker heat plot for Joes Flow

Description

Marker heat plot for Joes Flow

Usage

marker_heatJF(sample_data, ids, meta, grp, kmeans_groups, colors, sample_size)

Arguments

sample_data	Data frame or numeric matrix containing sample data
ids	Character vector of ids for each row in 'sample_data', corresponding to the labels in 'meta'
meta	Data frame containing metadata - first column should contain one row for each value in ids
grp	Column of meta to use for grouping of data
kmeans_groups	Vector containing Kmeans group label for each row in 'sample_data'
colors	Vector of colors for samples
sample_size	An integer indicating how many samples to use in the generation of the figure

Value

A grid graphics object

jcooperdevlin/JoesFlow documentation built on April 7, 2023, 12:42 p.m.