iidPhenoEval: iidPhenoEval function
In jeanlucj/AlfSimHlpR: Functions added to AlphaSimR to simplify simulating breeding schemes
Description
Usage
Arguments
Details
Value
Examples
View source: R/AnalysisFunctions.R
Description
function to take a data.frame coming from framePhenoRec and analyze it with individuals as a random effect with an IID covariance matrix
Usage
1
iidPhenoEval(phenoDF)
Arguments
phenoDF
A data.frame of phenotypic observations. See framePhenoRec for details.
Details
Given all the phenotypic records calculate the best prediction of the genotypic value for each individual using all its records
Value
Named real vector of the BLUPs of all individuals in phenoDF (names are the individual ids), with appropriate weights by error variance of the observation
Examples
1
2
phenoDF <- framePhenoRec(records, bsp)
iidBLUPs <- iidPhenoEval(phenoDF)
jeanlucj/AlfSimHlpR documentation built on Nov. 7, 2021, 5:10 p.m.
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Description Usage Arguments Details Value Examples
View source: R/AnalysisFunctions.R
Description
function to take a data.frame coming from framePhenoRec and analyze it with individuals as a random effect with an IID covariance matrix
Usage
1 | iidPhenoEval(phenoDF)
|
Arguments
phenoDF |
A data.frame of phenotypic observations. See |
Details
Given all the phenotypic records calculate the best prediction of the genotypic value for each individual using all its records
Value
Named real vector of the BLUPs of all individuals in phenoDF (names are the individual ids), with appropriate weights by error variance of the observation
Examples
1 2 | phenoDF <- framePhenoRec(records, bsp)
iidBLUPs <- iidPhenoEval(phenoDF)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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