phenoRecFromPop: phenoRecFromPop function

In jeanlucj/AlfSimHlpR: Functions added to AlphaSimR to simplify simulating breeding schemes

Description

function to make a tibble to be added to records

Usage

phenoRecFromPop(pop, bsp, stage, checks = FALSE)

Arguments

pop	The population from which to extract phenotypic records. Has to have been phenotyped
bsp	The breeding scheme parameter list
stage	At what stage of the breeding scheme this population was phenotyped. Necessary to determine the error variance and degree of replication
checks	Whether this was a population of experimentals or checks. Necessary to determine the degree of replication

Details

The tibbles coming from this function will be incorporated into records useful for maintaining the phenotypic observations across years and stages. For analysis, you need these phenotypes coupled to their ids and error variances

Value

A tibble of phenotypic records with six columns: 1. The id, 2. The id of the mother, 3. The id of the father, 4. The name of the stage, 5. The actual phenotype, 6. The error variance of the phenotype

Examples

phenoDF <- phenoRecFromPop(pop, bsp, stage)

jeanlucj/AlfSimHlpR documentation built on Nov. 7, 2021, 5:10 p.m.