vfb_stack_url: Make a URL for a set of VFB ids to be displayed in the stack...

In jefferis/vfbr: R Package to Access the Virtual Fly Brain project API

Make a URL for a set of VFB ids to be displayed in the stack browser

Description

Make a URL for a set of VFB ids to be displayed in the stack browser

Usage

vfb_stack_url(
  ids,
  terminfo = NULL,
  clear = FALSE,
  path = "/site/stacks",
  server = getOption("vfbr.server")
)

Arguments

ids	A character vector of IDs
terminfo	A VFB id used to choose which term information will be displayed next to the stack browser.
clear	Whether to clear items already displayed in the stack browser (default FALSE)
path	The path on the server containing the query page
server	The base url of the server

Value

character vector to open stack browser

Examples

# some gmr lines
ids=c("VFB_00004657","VFB_00023207","VFB_00023120","VFB_00022264")
template="VFBt_00100000"
u=vfb_stack_url(c(template, ids))

# find vfb id for this class of neuron often called fruitless mAL neuron
resdf=vfb_solr_query("synonym:mAL",filterquery = c("label:female","label:neuron"))
head(resdf)
u=vfb_stack_url(c(template, ids), terminfo=resdf$short_form[1], clear=TRUE)
## Not run: 
browseURL(u)

## End(Not run)

jefferis/vfbr documentation built on Sept. 24, 2024, 1:37 p.m.