Files in jeffreyat/M2EFM
M2EFM
.gitignore
DESCRIPTION
NAMESPACE
R/ExpressionData.R
R/MethylationData.R
R/MethylationData450k.R
R/ProfileData.R
R/dna_methylation.R
R/eqtl.R
R/genome.R
R/impute.R
R/iv_genes.txt
R/locations.R
R/m2eQTL.R
R/m2efm.R
R/package_loader.R
README.md
inst/extdata/CGI.sqlite
inst/extdata/EnsemblTranscripts.RDS
inst/extdata/Illumina2Entrez.sqlite
inst/extdata/KAO_BRCA_CLIN.txt
inst/extdata/KAO_BRCA_EXP.txt
inst/extdata/PROBELIST.txt
inst/extdata/TCGA_BRCA_CLIN.txt
inst/extdata/TCGA_BRCA_EXP.txt
inst/extdata/TCGA_BRCA_METH.txt
inst/extdata/configuration.json
inst/extdata/crossReactive.txt
man/ExpressionData.Rd
man/MethylationData.Rd
man/MethylationData450k.Rd
man/ProfileData.Rd
man/build_m2efm.Rd
man/evaluate.Rd
man/get_entrez_ids.Rd
man/get_gene_locs.Rd
man/get_genes.Rd
man/get_m2eqtls.Rd
man/get_pam50.Rd
man/get_probe_locs.Rd
man/get_probes.Rd
man/get_random_genes.Rd
man/load_exp.Rd
man/load_it.Rd
man/load_meth.Rd
man/mad_filter.Rd
man/mm.Rd
man/plot.M2EFM_evaluation.Rd
man/predict.M2EFM_models.Rd
man/reduce_stage.Rd
man/scale_samples.Rd
man/scale_values.Rd
man/summary.M2EFM_evaluation.Rd
man/summary.M2EFM_models.Rd
vignettes/M2EFM-vignette.Rmd
vignettes/M2EFM-vignette.log
vignettes/M2EFM-vignette.tex
