GWASpoly.thresh-class: S4 class with results from genome-wide scan and detection...

GWASpoly.thresh-classR Documentation

S4 class with results from genome-wide scan and detection threshold

Description

S4 class with results from genome-wide scan and detection threshold

Slots

map

data frame with columns Marker,Chrom,Position,Ref,Alt

pheno

data frame of phenotypes

geno

matrix with allele dosages

fixed

data frame of fixed effects

ploidy

ploidy

K

list of covariance matrices

scores

-log10(p) results

effects

estimated marker effects

params

parameters used for the analysis

threshold

thresholds for significance


jendelman/GWASpoly documentation built on Oct. 16, 2024, 5:59 a.m.