check_deaths: Compare Linelists from NBS and Surveillance Team and Report...

In jesse-smith/coviData: COVID-19 Data Munging Tools for the Shelby County Health Department

Compare Linelists from NBS and Surveillance Team and Report Differences

Description

Compare Linelists from NBS and Surveillance Team and Report Differences

Usage

check_deaths(
  surveillance_file = path_deaths("surv"),
  nbs_file = path_deaths("nbs"),
  directory = "V:/EPI DATA ANALYTICS TEAM/MORTALITY DATA/",
  surveillance_file_id = NULL,
  nbs_file_id = PATIENT_LOCAL_ID,
  save = FALSE
)

Arguments

surveillance_file	The name of the file containing the surveillance team linelist
nbs_file	The name of the file containing the NBS exported linelist
directory	The path to the directory containing both linelists
surveillance_file_id	The NBS ID column in the surveillance file. If NULL, check_deaths() assumes that this is the first column in the file.
nbs_file_id	The NBS ID column in the NBS linelist.
save	Should the results be saved to a file?

jesse-smith/coviData documentation built on Jan. 14, 2023, 11:08 a.m.