clust_all_levels: clust_all_levels

In jfores/SurvMap: Mapper Survival Analysis for Transcriptomic Data

clust_all_levels

Description

clust_all_levels

Usage

clust_all_levels(
  Dis_Est_Mod,
  samp_in_lev,
  distance_type = "cor",
  clust_type = "hierarchical",
  linkage_type = "single",
  optimal_clust_mode = "standard",
  n_bins_clust = 10
)

Arguments

Dis_Est_Mod	Disease estate model data for the complete dataset.
samp_in_lev	A list including the samples placed at each level. It is the output of the samples_in_levels function.
distance_type	The distance type employed.
optimal_clust_mode	The optimal cluster method selection.
n_bins_clust	The number of bines for histogram threshold selection. Used in the standard method for optimal number of clusters selection.

Value

Returns a list including the clusters found at each level.

Examples

## Not run: 
samples_in_levels(Dis_Est_Mod,samp_in_lev)
## End(Not run)

jfores/SurvMap documentation built on May 30, 2022, 10:57 p.m.