root_phyloseq_tree: Root Tree in phyloseq Object
In jfq3/QsRutils: R Functions Useful for Community Ecology
Description
Usage
Arguments
Details
Value
Examples
View source: R/root_phyloseq_tree.R
Description
Roots an unrooted tree in a phyloseq object
Usage
1
root_phyloseq_tree(phylo)
Arguments
phylo
A phyloseq object containing an unrooted tree
Details
The tree is rooted by the longest terminal branch.
Value
The same phyloseq object with a rooted tree
Examples
1
2
3
4
## Not run:
expt.rooted <- root_phyloseq_tree(expt.unrooted)
## End(Not run)
jfq3/QsRutils documentation built on Jan. 18, 2021, 12:40 a.m.
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Description Usage Arguments Details Value Examples
View source: R/root_phyloseq_tree.R
Description
Roots an unrooted tree in a phyloseq object
Usage
1 | root_phyloseq_tree(phylo)
|
Arguments
phylo |
A phyloseq object containing an unrooted tree |
Details
The tree is rooted by the longest terminal branch.
Value
The same phyloseq object with a rooted tree
Examples
1 2 3 4 | ## Not run:
expt.rooted <- root_phyloseq_tree(expt.unrooted)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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