jfukuyama/phyloseqGraphTest: Graph-Based Permutation Tests for Microbiome Data
Provides functions for graph-based multiple-sample testing and visualization of microbiome data, in particular data stored in 'phyloseq' objects. The tests are based on those described in Friedman and Rafsky (1979) <http://www.jstor.org/stable/2958919>, and the tests are described in more detail in Callahan et al. (2016) <doi:10.12688/f1000research.8986.1>.
Getting started
Browse package contents
Package details |
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| Author | Julia Fukuyama [aut, cre] |
| Maintainer | Julia Fukuyama <julia.fukuyama@gmail.com> |
| License | CC0 |
| Version | 0.1.1 |
| URL | https://github.com/jfukuyama/phyloseqGraphTest |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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