pop.freq: Allelic frequencies
In jgx65/hierfstat: Estimation and Tests of Hierarchical F-Statistics
pop.freq R Documentation
Allelic frequencies
Description
Estimates allelic frequencies for each population and locus
Usage
pop.freq(dat,diploid=TRUE)
Arguments
dat
a data frame where the first column contains the population to which the different individuals belong, and the following columns contain the genotype of the individuals -one locus per column-
diploid
specify whether the data set consists of diploid (default) or haploid data
Value
A list containing allele frequencies. Each element of the list is one locus.
For each locus, Populations are in columns and alleles in rows
Author(s)
Jerome Goudet jerome.goudet@unil.ch
Examples
data(gtrunchier)
pop.freq(gtrunchier[,-2])
jgx65/hierfstat documentation built on Nov. 21, 2024, 9:06 p.m.
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| pop.freq | R Documentation |
Allelic frequencies
Description
Estimates allelic frequencies for each population and locus
Usage
pop.freq(dat,diploid=TRUE)Arguments
dat |
a data frame where the first column contains the population to which the different individuals belong, and the following columns contain the genotype of the individuals -one locus per column- |
diploid |
specify whether the data set consists of diploid (default) or haploid data |
Value
A list containing allele frequencies. Each element of the list is one locus. For each locus, Populations are in columns and alleles in rows
Author(s)
Jerome Goudet jerome.goudet@unil.ch
Examples
data(gtrunchier)
pop.freq(gtrunchier[,-2])
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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