API for jhammelman/spatzie
Identification of enriched motif pairs from chromatin interaction data
| Global functions | |
|---|---|
| anchor_pair_enrich | Man page Source code |
| anchor_pair_example_count | Man page |
| anchor_pair_example_match | Man page |
| anchor_pair_example_score | Man page |
| check_required_package | Source code |
| compare_motif_pairs | Man page Source code |
| compare_pairs_example | Man page |
| filter_motifs | Man page Source code |
| filter_pair_motifs | Man page Source code |
| filter_pairs_example | Man page |
| find_ep_coenrichment | Man page Source code |
| get_specific_interactions | Man page Source code |
| int_data_k562 | Man page |
| int_data_mslcl | Man page |
| int_data_yy1 | Man page |
| interactions_yy1 | Man page |
| interactions_yy1_enhancer | Man page |
| interactions_yy1_ep | Man page |
| interactions_yy1_promoter | Man page |
| plot_motif_occurrence | Man page Source code |
| scan_interactions_example | Man page |
| scan_interactions_example_filtered | Man page |
| scan_motifs | Man page Source code |
| spatzie | Man page |
