donut_biom: Make a donut graph of two taxonomic levels

In jhbadger/cipphyloseq: Adds Additional Features (plots, DESeq2) to phyloseq

Description

Make a donut graph of two taxonomic levels

Usage

donut_biom(biom, samples = NULL, rank1, rank2, inner_colors,
  outer_colors, threshold = 1, title = "", verbose = FALSE)

Arguments

biom	phyloseq object
inner_colors	colors four inner circle
outer_colors	colors for outer circle
threshold	threshold percent below which don't display
title	title of graph
group	vector identifying the group for each slice
labels	vector of labels for individual slices

Examples

donut_biom()

jhbadger/cipphyloseq documentation built on May 24, 2019, 2:04 a.m.