heatmap_biom: Make a heat map of a biom object with clustering
In jhbadger/cipphyloseq: Adds Additional Features (plots, DESeq2) to phyloseq
Description
Usage
Arguments
Examples
Description
Make a heat map of a biom object with clustering
Usage
1
heatmap_biom(biom, rank = "LKT", group, title = "", ntop = 40)
Arguments
biom
phyloseq object
rank
string giving taxonomic rank to compare at
group
vector identifying the group
title
string giving the title
ntop
maximum number of rows
Examples
1
jhbadger/cipphyloseq documentation built on May 24, 2019, 2:04 a.m.
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Description Usage Arguments Examples
Description
Make a heat map of a biom object with clustering
Usage
1 | heatmap_biom(biom, rank = "LKT", group, title = "", ntop = 40)
|
Arguments
biom |
phyloseq object |
rank |
string giving taxonomic rank to compare at |
group |
vector identifying the group |
title |
string giving the title |
ntop |
maximum number of rows |
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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