tests/testthat/test-parse_vcf.R
In jhrcook/KrasAlleleCna: The Allele-Specific CNA Analysis of KRAS in CRC
context("test-parse_vcf")
test_that("VCF files are properly parsed", {
vcf_example <- "005ea64b-18e7-4f50-b940-38322a96e034_mpileup.vcf"
vcf <- parse_vcf(vcf_example)
expect_true(all(c("start", "ref", "alt", "num_high_qual_bases", "allelic_depths") %in% colnames(vcf)))
})
jhrcook/KrasAlleleCna documentation built on May 28, 2019, 1:22 p.m.
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context("test-parse_vcf")
test_that("VCF files are properly parsed", {
vcf_example <- "005ea64b-18e7-4f50-b940-38322a96e034_mpileup.vcf"
vcf <- parse_vcf(vcf_example)
expect_true(all(c("start", "ref", "alt", "num_high_qual_bases", "allelic_depths") %in% colnames(vcf)))
})
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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