Numeric-format-data: Numeric format genotypic data

In jiabowang/GAPIT3: GAPIT (Genomic Association and Prediction Integrated Tool)

Numeric format genotypic data

Description

Numeric format genotypic data

Details

Genetic data in numeric format. Samples in rows. The first column is the sample names (taxa). Subsequent columns are genotypes. Homozygotes are scored as either 0 or 2. Heterozygotes are scored as 1.

Examples

 
## Not run: 
myGDFile <- system.file("extdata", "mdp_numeric.txt.gz", package = "GAPIT3")
myGD  <- read.table(myGDFile, header = FALSE)
myGD[1:4, 1:6]

## End(Not run)

jiabowang/GAPIT3 documentation built on March 6, 2025, 2:21 a.m.