jinghuazhao/pQTLtools: A Protein Quantitative Trait Locus Toolkit

This repository collects information on a number of protein panels, linking function for cis/trans classification, 2D manhattan plots, 3D-plotly plots, forest plots among others available from R/gap; query results on genes, regions, and SNPs via PhenoScanner, adding functionality to check for replication across platforms and aspects of protein-related analysis such as pQTL-Mendelian Randomization via TwoSampleMR, linkage through UniProt IDs to other resources.

Getting started

Package details

LicenseMIT + file LICENSE
URL https://github.com/jinghuazhao/pQTLtools
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
jinghuazhao/pQTLtools documentation built on Sept. 26, 2022, 5:53 p.m.