Man pages for jleechung/schelpers
Helper functions for single cell RNA-seq analyses with Seurat
| CombinedPlot | Combined plots |
| condByIdent | Compare conditions for each identity class |
| ens2gene | Map ensembl IDs to gene names |
| ExploreClusterResolutions | Visualise clustering parameters |
| FindMarkersBaseline | Find Markers for all clusters against a baseline cluster |
| gencode.vM27.annotation.map | Ensembl gene, transcript and common gene name map based on... |
| parseRSEM | Parse RSEM genes.results to a GCM |
| parseSTARlog | Parse STAR <Sample>.Log.final.out files prefixed by sample... |
| ref | Reference panel from https://elifesciences.org/articles/43882 |
| returnHits | Map FindAllMarkers output to a reference |
| scpalette | Kelly and Alphabet palette |
| see | Peak into objects |
| ulen | Unique length |
