FindMarkersBaseline: Find Markers for all clusters against a baseline cluster
In jleechung/schelpers: Helper functions for single cell RNA-seq analyses with Seurat
Description
Usage
Arguments
Value
Description
Find Markers for all clusters against a baseline cluster
Usage
1
2
3
4
5
6
7
FindMarkersBaseline(
seu,
baseline,
only.pos = TRUE,
n.markers = 30,
dotplot.cex = 10
)
Arguments
seu
Seurat object
baseline
cluster to compare all clusters against
only.pos
return up-regulated markers against the baseline only
n.markers
number of markers to draw in boxplot
dotplot.cex
dotplot axis text size
Value
plots and table of markers
jleechung/schelpers documentation built on Dec. 21, 2021, 1:07 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Find Markers for all clusters against a baseline cluster
Usage
1 2 3 4 5 6 7 | FindMarkersBaseline(
seu,
baseline,
only.pos = TRUE,
n.markers = 30,
dotplot.cex = 10
)
|
Arguments
seu |
Seurat object |
baseline |
cluster to compare all clusters against |
only.pos |
return up-regulated markers against the baseline only |
n.markers |
number of markers to draw in boxplot |
dotplot.cex |
dotplot axis text size |
Value
plots and table of markers
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.