API for jlmelville/uwot
The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality Reduction

Global functions
.onUnload Source code
FNN_nn Source code
abspath Source code
agspectral_init Source code
all_nn_indices_are_loaded Source code
annoy_build Source code
annoy_create Source code
annoy_nn Source code
annoy_search Source code
annoy_search_parallel Source code
annoy_search_parallel_cpp Source code
annoy_search_serial Source code
apply_pca Source code
apply_scaling Source code
approx_affinity_graph Source code
attr_to_scale_info Source code
bigstatsr_is_installed Source code
bigstatsr_scores Source code
calc_row_probabilities_parallel Source code
categorical_intersection Source code
categorical_intersection_df Source code
categorical_simplicial_set_intersection Source code
check_graph Source code
check_graph_list Source code
check_sparse_graph Source code
checkna Source code
colMaxs Source code
col_max_normalize Source code
col_sum_normalize Source code
connected_components Source code
connected_components_undirected Source code
create_ann Source code
data2set Source code
default_num_threads Source code
dist_nn Source code
fast_intersection Source code
fast_intersection_cpp Source code
find_ab_params Source code
find_categoricals Source code
find_nn Source code
form_modified_laplacian Source code
form_normalized_laplacian Source code
fuzzy_set_union Source code
fuzzy_simplicial_set Source code
general_simplicial_set_intersection Source code
general_sset_intersection Source code
general_sset_intersection_cpp Source code
general_sset_union_cpp Source code
get_nndescent_build_args Source code
get_nndescent_knn_args Source code
get_nndescent_query_args Source code
get_opt_args Source code
get_rcppannoy Source code
hardware_concurrency Source code
hnsw_build Source code
hnsw_load Source code
hnsw_nn Source code
hnsw_search Source code
init_is_spectral Source code
init_new_embedding Source code
init_transform Source code
init_transform_parallel Source code
irlba_eigs_asym Source code
irlba_eigs_sym Source code
irlba_laplacian_eigenmap Source code
irlba_normalized_laplacian_init Source code
irlba_scores Source code
irlba_spectral_init Source code
irlba_spectral_tsvd Source code
irlba_svdr_scores Source code
irlba_tsvd_normalized_laplacian_init Source code
is_binary_metric Source code
is_installed Source code
is_ok_hnsw_metric Source code
is_sparse_matrix Source code
is_win7 Source code
laplacian_eigenmap Source code
lmerge Source code
load_uwot Man page Source code
lsplit_unnamed Source code
lvish Man page Source code
lvish_epochs Source code
lvish_samples Source code
make_epochs_per_sample Source code
nn2set Source code
nn_graph_nbrs Source code
nn_graph_nbrs_list Source code
nn_graph_row_names Source code
nn_graph_row_names_list Source code
nn_graph_t Source code
nn_is_annoy Source code
nn_is_hnsw Source code
nn_is_precomputed Source code
nn_is_single Source code
nn_to_sparse Source code
nndescent_build Source code
nndescent_nn Source code
nndescent_search Source code
nng_to_sparse Source code
normalized_laplacian_init Source code
optimize_graph_layout Man page Source code
optimize_layout_r Source code
order_sparse Source code
pca_init Source code
perplexity_similarities Source code
pluralize Source code
prcomp_rsvd Source code
progress_for Source code
rand_init Source code
rand_init_lv Source code
rand_nbr_graph Source code
rand_nbr_idx Source code
range_scale Source code
remove_scaling_attrs Source code
report_varex Source code
reset_local_connectivity Source code
reset_local_metrics_parallel Source code
rowMaxs Source code
row_max_normalize Source code
row_sum_normalize Source code
rspectra_eigs_asym Source code
rspectra_eigs_sym Source code
rspectra_is_installed Source code
rspectra_laplacian_eigenmap Source code
rspectra_normalized_laplacian_init Source code
save_uwot Man page Source code
scale_and_jitter Source code
scale_coords Source code
scale_input Source code
scale_radii Source code
set_intersect Source code
similarity_graph Man page Source code
simplicial_set_intersect Man page Source code
simplicial_set_union Man page Source code
smooth_knn Source code
smooth_knn_distances_parallel Source code
smooth_knn_matrix Source code
sort_eigenvectors Source code
sparse_nn Source code
sparse_tri_nn Source code
spectral_init Source code
stime Source code
summarize Source code
svd_scores Source code
symmetrize Source code
tsmessage Source code
tumap Man page Source code
umap Man page Source code
umap2 Man page Source code
umap_transform Man page Source code
unload_uwot Man page Source code
uwot Source code
validate_nn Source code
x2m Source code
x2nn Source code
x2nv Source code
x2set Source code
jlmelville/uwot documentation built on Sept. 9, 2024, 11:17 a.m.