make_eg_to_go_map: Create GO to Entrez Gene maps for chip-based packages

In jmacdon/AnnotationDbi: Manipulation of SQLite-based annotations in Bioconductor

Description

Create a new map object mapping Entrez ID to GO (or vice versa) given a chip annotation data package.

This is a temporary solution until a more general pluggable map solution comes online.

Usage

make_eg_to_go_map(chip)

Arguments

chip	The name of the annotation data package.

Value

Either a Go3AnnDbMap or a RevGo3AnnDbMap.

Author(s)

Seth Falcon and Hervé Pagès

Examples

library("hgu95av2.db")

eg2go = make_eg_to_go_map("hgu95av2.db")
sample(eg2go, 2)

go2eg = make_go_to_eg_map("hgu95av2.db")
sample(go2eg, 2)

jmacdon/AnnotationDbi documentation built on Oct. 22, 2021, 9:14 p.m.