makeGOGraph: A convenience function to generate graphs based on the GO.db...

Description Usage Arguments Author(s) See Also Examples

View source: R/GOTerms.R

Description

makeGOGraph is a function to quickly convert any of the three Gene Ontologies in GO.db into a graphNEL object where each edge is given a weight of 1.

Usage

1
  makeGOGraph(ont = c("bp","mf","cc"))

Arguments

ont

Specifies the ontology: "cc", "bp" or "mf".

Author(s)

Marc Carlson

See Also

GOTerms

Examples

1
2
  ## makes a GO graph from the CC ontology 
  f <- makeGOGraph("cc")

jmacdon/AnnotationDbi documentation built on June 8, 2021, 4:07 p.m.