Description Usage Arguments Value Examples
This function implements the SNPRMA method for summarization of SNP data. It works directly with the CEL files, saving memory.
1 | justSNPRMA(filenames, verbose = TRUE, phenoData = NULL, normalizeToHapmap = TRUE)
|
filenames |
character vector with the filenames. |
verbose |
logical flag for verbosity. |
phenoData |
a |
normalizeToHapmap |
Normalize to Hapmap? Should always be TRUE, but it's kept here for future use. |
SnpQSet
or a SnpCnvQSet
, depending on the array type.
1 | ## snprmaResults <- justSNPRMA(list.celfiles())
|
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