jmarshallnz/pubmlst: Infer Sequence Types Based On Allelic Profiles

Utilises the database from PubMLST (http://pubmlst.org) to infer sequence types and species given an allelic profile for Campylobacter jejuni and coli. Imputes missing alleles if present.

Getting started

Package details

Maintainer
LicenseGPL-3
Version0.2
URL http://github.com/jmarshallnz/pubmlst
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("jmarshallnz/pubmlst")
jmarshallnz/pubmlst documentation built on Jan. 10, 2018, 5:07 a.m.