download_latest_sequences: Download the latest PubMLST Campylobacter jejuni and coli...
In jmarshallnz/pubmlst: Infer Sequence Types Based On Allelic Profiles
Description
Usage
Arguments
Value
See Also
Examples
Description
Download the latest PubMLST Campylobacter jejuni and coli sequences.
Usage
1
download_latest_sequences(url = "http://pubmlst.org/data/profiles/campylobacter.txt")
Arguments
url
the PubMLST URL to use.
Value
A data frame of sequence types, their allelic profile, and clonal complex.
See Also
pubmlst
http://pubmlst.org
Examples
1
2
3
# not run
# mlst <- download_latest_sequences()
# head(mlst)
jmarshallnz/pubmlst documentation built on Nov. 16, 2020, 2:44 a.m.
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Description Usage Arguments Value See Also Examples
Description
Download the latest PubMLST Campylobacter jejuni and coli sequences.
Usage
1 | download_latest_sequences(url = "http://pubmlst.org/data/profiles/campylobacter.txt")
|
Arguments
url |
the PubMLST URL to use. |
Value
A data frame of sequence types, their allelic profile, and clonal complex.
See Also
pubmlst http://pubmlst.org
Examples
1 2 3 | # not run
# mlst <- download_latest_sequences()
# head(mlst)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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