download_latest_sequences: Download the latest PubMLST Campylobacter jejuni and coli...

Description Usage Arguments Value See Also Examples

View source: R/pubmlst.R

Description

Download the latest PubMLST Campylobacter jejuni and coli sequences.

Usage

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  download_latest_sequences(url = "http://pubmlst.org/data/profiles/campylobacter.txt")

Arguments

url

the PubMLST URL to use.

Value

A data frame of sequence types, their allelic profile, and clonal complex.

See Also

pubmlst http://pubmlst.org

Examples

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# not run
# mlst <- download_latest_sequences()
# head(mlst)

jmarshallnz/pubmlst documentation built on Jan. 10, 2018, 5:07 a.m.