plot.stPredict: Plot stPredict objects

In jmhewitt/telefit: Estimation and Prediction for Remote Effects Spatial Process Models

Description

This function provides basic plotting for telefit package data.

Usage

## S3 method for class 'stPredict'
plot(
  x,
  type = "prediction",
  t = NULL,
  stFit = NULL,
  stData = NULL,
  err.comparison = NULL,
  err.var = NULL,
  err.lab = err.var,
  pattern = 1,
  dots = NULL,
  burn = 1,
  signif.telecon = F,
  ...
)

Arguments

x	Object of class stPredict to plot.
type	One of the following options to specify what type of plot to build prediction Spatial plot of predicted response variable for a given timepoint t. residual Spatial plot of residual for a given timepoint t. Note, this plot is only available if the model has been evaluated and the predictions have been compared to another response dataset. observed Spatial plot of observed response variable for a given timepoint t. Note, this plot is only available if the model has been evaluated and the predictions have been compared to another response dataset. standard_error (or 'se') Spatial plot of prediction standard errors for a given timepoint t. local Spatial plot of the local components of the response variable for a given timepoint t. remote Spatial plot of the remote components of the response variable for a given timepoint t. w Spatial plot of the spatial noise component of the reponse variable for a given timepoint t. correlation Scatterplot of observed vs. predicted response variables for a given timepoint t. Note, this plot is only available if the model has been evaluated and the predictions have been compared to another response dataset. teleconnection Spatial plot of remote coefficients associated with a location coord.s in the spatial response domain. teleconnection_knot Spatial plot of remote knot coefficients associated with a location coord.s in the spatial response domain. teleconnection_knot_transect errors Series of plots that measure overall prediction error across prediction timepoints. cat.prediction Spatial plot of the predicted response variable category (i.e., above/below average) for a given timepoint t. truth Note, this plot is only available if the model has been evaluated and the predictions have been compared to another response dataset. residual Note, this plot is only available if the model has been evaluated and the predictions have been compared to another response dataset. eof_alpha_knots A map of the local domain where the plotted colors show the remote influence coefficients mapped onto the eof pattern specified by the "pattern" argument.
t	timepoint to plot. Will automatically plot the first timepoint if t=NULL.
stFit	Object of class stFit to provide related information and structures for plotting estimated teleconnection effects
stData	Object of class stData to provide coordinate and related information for plotting estimated teleconnection effects
err.comparison	data.frame with Year column and a column for a variable that will be used to plot annual errors against
err.var	name of variable in err.comparison for plotting against
err.lab	label for name of variable in err.comparison for plotting against
pattern	if type=='eof_alpha_knots', this specified which eof the remote coefficients should be mapped onto and then plotted over the local domain
dots	additional named arguments with defaults to pass to additional functions
burn	number of observations to exclude from graph
signif.telecon	TRUE to highlight significant teleconnection effects
...	additional arguments to be passed to lower-level plotting functions

Value

a ggplot object with the specified map

Examples

data("coprecip.predict")
p = plot(coprecip.predict, t=1981)

jmhewitt/telefit documentation built on Feb. 9, 2020, 7:15 p.m.