Description Usage Format Details See Also Examples
Count of Low CAI codons for Gencode mouse mm10 vM12
1 |
integer number of codons where the CAI is 0.5 or lower, named by transcript_name defined in the Gencode GTF file for vM12.
This data is derived from codon adaptability index (CAI) data, summarized to count the number of residues where the CAI value is 0.5 or lower. This value indicates the codon is no more than 50 amino acid.
Other Mouse codon usage data: GencodeVM12mm10caiQ1mean
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GencodeVM12mm10cdsLength
1 2 3 | data(GencodeVM12mm10caiCtLow);
## Print the first 20 entries
print(head(GencodeVM12mm10caiCtLow, 20));
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