Man pages for jnpaulson/pandaR
PANDA Algorithm
| calcDegree | Calculate regulatory network degree |
| calcDegreeDifference | Calculate difference in degrees |
| getCoopNet | getCoopNet |
| getCoRegNet | getCoRegNet |
| getRegNet | getRegNet |
| importPandaMatlab | Panda Matlab importer |
| multiplot | Multiple plots |
| panda | Passing Messages between Biological Networks to Refine... |
| pandaR | pandaR: Passing Messages between Biological Networks to... |
| pandaResult | Analysis result from PANDA algorithm on toy data |
| pandaResultPairs | Analysis result from PANDA algorithm on toy data converted... |
| pandaToyData | Toy gene expression, motif, and ppi data |
| plotCommunityDetection | Community detection plot |
| plotGraph | Plot graph |
| plotZ | Comparison of Z scores between two PANDA runs |
| plotZbyTF | Plot Z by TF out-degree quantiles |
| print.panda | print.panda |
| subnetwork | Subnetwork |
| summary.panda | Summary.panda |
| targetedGenes | targetedGenes |
| testMotif | Check motif |
| topedges | Top edges |
