pandaToyData: Toy gene expression, motif, and ppi data
In jnpaulson/pandaR: PANDA Algorithm
pandaToyData R Documentation
Toy gene expression, motif, and ppi data
Description
This data is a list containing three data.frames. The motif data.frame describes a set of pairwise connections where a specific known sequence motif of a transcription factor was found upstream of the corresponding gene. The expression data.frame is a set of 1000 gene expression levels measured across 50 samples. Finally, the ppi data.frame describes a set of known pairwise protein interactions.
Usage
pandaToyData
Format
A list containing 3 data.frames
Value
A list of length 3
References
Glass K, Huttenhower C, Quackenbush J, Yuan GC. Passing Messages Between Biological Networks to Refine Predicted Interactions. PLoS One. 2013 May 31;8(5):e64832.
jnpaulson/pandaR documentation built on May 13, 2024, 11:30 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| pandaToyData | R Documentation |
Toy gene expression, motif, and ppi data
Description
This data is a list containing three data.frames. The motif data.frame describes a set of pairwise connections where a specific known sequence motif of a transcription factor was found upstream of the corresponding gene. The expression data.frame is a set of 1000 gene expression levels measured across 50 samples. Finally, the ppi data.frame describes a set of known pairwise protein interactions.
Usage
pandaToyDataFormat
A list containing 3 data.frames
Value
A list of length 3
References
Glass K, Huttenhower C, Quackenbush J, Yuan GC. Passing Messages Between Biological Networks to Refine Predicted Interactions. PLoS One. 2013 May 31;8(5):e64832.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.