The phyloseq package is a recent addition to the Bioconductor repository. One of the goals of the phyloseq project is syntactically streamlined tools for creating publication-quality graphics based on phylogenetic sequencing data using ggplot2. This package is intended to complement phyloseq by providing tools for animating phyloseq graphics. However, some of the tools can work generally on any data.frame, and so may be of use beyond phylogenetic sequencing analysis. The animations are created entirely via ggplot2 and animation packages. The animation package further depends on external conversion tools, e.g. ImageMagick or FFmpeg.
Package details |
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Author | Paul J. McMurdie <mcmurdie@stanford.edu> |
Maintainer | Paul J. McMurdie <mcmurdie@stanford.edu> |
License | AGPL-3 |
Version | 0.1.1 |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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