Files in john-harrold/ubiquity

PKPD, PBPK, and Systems Pharmacology Modeling Tools

.Rbuildignore

.github/workflows/R-CMD-check.yaml

.gitignore

DESCRIPTION

LICENSE

NAMESPACE

NEWS.md R/ubiquity.r README.md

_pkgdown.yml

build_custom.R

docs/.nojekyll

docs/404.html

docs/CNAME

docs/LICENSE-text.html

docs/apple-touch-icon-120x120.png

docs/apple-touch-icon-152x152.png

docs/apple-touch-icon-180x180.png

docs/apple-touch-icon-60x60.png

docs/apple-touch-icon-76x76.png

docs/apple-touch-icon.png

docs/articles/Deployment.html

docs/articles/Deployment_files/header-attrs-2.11/header-attrs.js

docs/articles/Deployment_files/header-attrs-2.6/header-attrs.js

docs/articles/Deployment_files/header-attrs-2.9/header-attrs.js

docs/articles/Estimation-parent-op.png

docs/articles/Estimation-parent-tc.png

docs/articles/Estimation.html

docs/articles/Estimation_files/header-attrs-2.11/header-attrs.js

docs/articles/Estimation_files/header-attrs-2.6/header-attrs.js

docs/articles/Estimation_files/header-attrs-2.9/header-attrs.js

docs/articles/Language.html

docs/articles/Language_files/header-attrs-2.11/header-attrs.js

docs/articles/Language_files/header-attrs-2.6/header-attrs.js

docs/articles/Language_files/header-attrs-2.9/header-attrs.js

docs/articles/NCA.html

docs/articles/NCA_files/chroma-1.3.3/chroma.min.js

docs/articles/NCA_files/figure-html/unnamed-chunk-7-1.png

docs/articles/NCA_files/handsontable-6.1.1/all.min.js

docs/articles/NCA_files/handsontable-6.1.1/handsontable.full.min.css

docs/articles/NCA_files/handsontable-6.1.1/handsontable.full.min.js

docs/articles/NCA_files/handsontable-6.2.2/all.min.js

docs/articles/NCA_files/handsontable-6.2.2/handsontable.full.min.css

docs/articles/NCA_files/handsontable-6.2.2/handsontable.full.min.js

docs/articles/NCA_files/header-attrs-2.11/header-attrs.js

docs/articles/NCA_files/header-attrs-2.6/header-attrs.js

docs/articles/NCA_files/header-attrs-2.9/header-attrs.js

docs/articles/NCA_files/htmlwidgets-1.5.3.9000/htmlwidgets.js

docs/articles/NCA_files/htmlwidgets-1.5.3/htmlwidgets.js

docs/articles/NCA_files/htmlwidgets-1.5.4/htmlwidgets.js

docs/articles/NCA_files/htmlwidgets-1.6.1/htmlwidgets.js

docs/articles/NCA_files/htmlwidgets-1.6.2/htmlwidgets.js

docs/articles/NCA_files/htmlwidgets-1.6.4/htmlwidgets.js

docs/articles/NCA_files/jquery-3.2.1/jquery.min.js

docs/articles/NCA_files/numbro.languages-2.0.6/languages.min.js

docs/articles/NCA_files/rhandsontable-0.3.7/lib/chroma/chroma.min.js

docs/articles/NCA_files/rhandsontable-0.3.7/lib/handsontable/all.min.js

docs/articles/NCA_files/rhandsontable-0.3.7/lib/handsontable/handsontable.full.min.css

docs/articles/NCA_files/rhandsontable-0.3.7/lib/handsontable/handsontable.full.min.js

docs/articles/NCA_files/rhandsontable-0.3.7/lib/jquery/jquery.min.js

docs/articles/NCA_files/rhandsontable-0.3.7/lib/numbro/languages.min.js

docs/articles/NCA_files/rhandsontable-0.3.7/lib/sparkline/jquery.sparkline.min.js

docs/articles/NCA_files/rhandsontable-0.3.7/rhandsontable.css

docs/articles/NCA_files/rhandsontable-0.3.7/rhandsontable.js

docs/articles/NCA_files/rhandsontable-0.3.7/rhandsontable.yaml

docs/articles/NCA_files/rhandsontable-binding-0.3.7/rhandsontable.js

docs/articles/NCA_files/rhandsontable-binding-0.3.8/rhandsontable.js

docs/articles/NCA_files/sparkline-2.1.2/jquery.sparkline.min.js

docs/articles/NCA_files/tabwid-1.0.0/tabwid.css

docs/articles/NCA_files/tabwid-1.1.2/tabwid.css

docs/articles/NCA_files/tabwid-1.1.3/tabwid.css

docs/articles/NCA_files/tabwid-1.1.3/tabwid.js

docs/articles/Reporting.html

docs/articles/Reporting_files/header-attrs-2.11/header-attrs.js

docs/articles/Reporting_files/header-attrs-2.6/header-attrs.js

docs/articles/Reporting_files/header-attrs-2.9/header-attrs.js

docs/articles/Reporting_files/tabwid-1.0.0/tabwid.css

docs/articles/Reporting_files/tabwid-1.1.2/tabwid.css

docs/articles/Reporting_files/tabwid-1.1.3/tabwid.css

docs/articles/Reporting_files/tabwid-1.1.3/tabwid.js

docs/articles/ShinyApp-ss-Bolus.png

docs/articles/ShinyApp-ss-IIV.png

docs/articles/ShinyApp-ss-Infusion.png

docs/articles/ShinyApp-ss-Initialization.png

docs/articles/ShinyApp-ss-Pop_timecourse.png

docs/articles/ShinyApp-ss-Save.png

docs/articles/Simulation.html

docs/articles/Simulation_files/chroma-1.3.3/chroma.min.js

docs/articles/Simulation_files/figure-html/unnamed-chunk-11-1.png

docs/articles/Simulation_files/figure-html/unnamed-chunk-13-1.png

docs/articles/Simulation_files/figure-html/unnamed-chunk-16-1.png

docs/articles/Simulation_files/figure-html/unnamed-chunk-18-1.png

docs/articles/Simulation_files/handsontable-6.1.1/all.min.js

docs/articles/Simulation_files/handsontable-6.1.1/handsontable.full.min.css

docs/articles/Simulation_files/handsontable-6.1.1/handsontable.full.min.js

docs/articles/Simulation_files/handsontable-6.2.2/all.min.js

docs/articles/Simulation_files/handsontable-6.2.2/handsontable.full.min.css

docs/articles/Simulation_files/handsontable-6.2.2/handsontable.full.min.js

docs/articles/Simulation_files/header-attrs-2.11/header-attrs.js

docs/articles/Simulation_files/header-attrs-2.6/header-attrs.js

docs/articles/Simulation_files/header-attrs-2.9/header-attrs.js

docs/articles/Simulation_files/htmlwidgets-1.5.3.9000/htmlwidgets.js

docs/articles/Simulation_files/htmlwidgets-1.5.3/htmlwidgets.js

docs/articles/Simulation_files/htmlwidgets-1.5.4/htmlwidgets.js

docs/articles/Simulation_files/htmlwidgets-1.6.1/htmlwidgets.js

docs/articles/Simulation_files/htmlwidgets-1.6.2/htmlwidgets.js

docs/articles/Simulation_files/htmlwidgets-1.6.4/htmlwidgets.js

docs/articles/Simulation_files/jquery-3.2.1/jquery.min.js

docs/articles/Simulation_files/numbro.languages-2.0.6/languages.min.js

docs/articles/Simulation_files/rhandsontable-0.3.7/lib/chroma/chroma.min.js

docs/articles/Simulation_files/rhandsontable-0.3.7/lib/handsontable/all.min.js

docs/articles/Simulation_files/rhandsontable-0.3.7/lib/handsontable/handsontable.full.min.css

docs/articles/Simulation_files/rhandsontable-0.3.7/lib/handsontable/handsontable.full.min.js

docs/articles/Simulation_files/rhandsontable-0.3.7/lib/jquery/jquery.min.js

docs/articles/Simulation_files/rhandsontable-0.3.7/lib/numbro/languages.min.js

docs/articles/Simulation_files/rhandsontable-0.3.7/lib/sparkline/jquery.sparkline.min.js

docs/articles/Simulation_files/rhandsontable-0.3.7/rhandsontable.css

docs/articles/Simulation_files/rhandsontable-0.3.7/rhandsontable.js

docs/articles/Simulation_files/rhandsontable-0.3.7/rhandsontable.yaml

docs/articles/Simulation_files/rhandsontable-binding-0.3.7/rhandsontable.js

docs/articles/Simulation_files/rhandsontable-binding-0.3.8/rhandsontable.js

docs/articles/Simulation_files/sparkline-2.1.2/jquery.sparkline.min.js

docs/articles/Titration.html

docs/articles/Titration_files/chroma-1.3.3/chroma.min.js

docs/articles/Titration_files/figure-html/unnamed-chunk-12-1.png

docs/articles/Titration_files/figure-html/unnamed-chunk-20-1.png

docs/articles/Titration_files/figure-html/unnamed-chunk-25-1.png

docs/articles/Titration_files/figure-html/unnamed-chunk-38-1.png

docs/articles/Titration_files/handsontable-6.1.1/all.min.js

docs/articles/Titration_files/handsontable-6.1.1/handsontable.full.min.css

docs/articles/Titration_files/handsontable-6.1.1/handsontable.full.min.js

docs/articles/Titration_files/handsontable-6.2.2/all.min.js

docs/articles/Titration_files/handsontable-6.2.2/handsontable.full.min.css

docs/articles/Titration_files/handsontable-6.2.2/handsontable.full.min.js

docs/articles/Titration_files/header-attrs-2.11/header-attrs.js

docs/articles/Titration_files/header-attrs-2.6/header-attrs.js

docs/articles/Titration_files/header-attrs-2.9/header-attrs.js

docs/articles/Titration_files/htmlwidgets-1.5.3.9000/htmlwidgets.js

docs/articles/Titration_files/htmlwidgets-1.5.3/htmlwidgets.js

docs/articles/Titration_files/htmlwidgets-1.5.4/htmlwidgets.js

docs/articles/Titration_files/htmlwidgets-1.6.1/htmlwidgets.js

docs/articles/Titration_files/htmlwidgets-1.6.2/htmlwidgets.js

docs/articles/Titration_files/htmlwidgets-1.6.4/htmlwidgets.js

docs/articles/Titration_files/jquery-3.2.1/jquery.min.js

docs/articles/Titration_files/numbro.languages-2.0.6/languages.min.js

docs/articles/Titration_files/rhandsontable-0.3.7/lib/chroma/chroma.min.js

docs/articles/Titration_files/rhandsontable-0.3.7/lib/handsontable/all.min.js

docs/articles/Titration_files/rhandsontable-0.3.7/lib/handsontable/handsontable.full.min.css

docs/articles/Titration_files/rhandsontable-0.3.7/lib/handsontable/handsontable.full.min.js

docs/articles/Titration_files/rhandsontable-0.3.7/lib/jquery/jquery.min.js

docs/articles/Titration_files/rhandsontable-0.3.7/lib/numbro/languages.min.js

docs/articles/Titration_files/rhandsontable-0.3.7/lib/sparkline/jquery.sparkline.min.js

docs/articles/Titration_files/rhandsontable-0.3.7/rhandsontable.css

docs/articles/Titration_files/rhandsontable-0.3.7/rhandsontable.js

docs/articles/Titration_files/rhandsontable-0.3.7/rhandsontable.yaml

docs/articles/Titration_files/rhandsontable-binding-0.3.7/rhandsontable.js

docs/articles/Titration_files/rhandsontable-binding-0.3.8/rhandsontable.js

docs/articles/Titration_files/sparkline-2.1.2/jquery.sparkline.min.js

docs/articles/covariates.png

docs/articles/dosing_bolus.png

docs/articles/index.html

docs/articles/nca_reporting-md.png

docs/articles/nca_reporting-sd.png

docs/articles/nca_reporting-sparse.png

docs/articles/report_template_layout.png

docs/articles/system-estimation_example.png

docs/articles/system-paper-mathematical_sets.png

docs/articles/system-paper-parameter_sets.png

docs/articles/system-tmdd.png

docs/articles/ubiquity_hex.png

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/deps/bootstrap-5.1.0/bootstrap.bundle.min.js

docs/deps/bootstrap-5.1.0/bootstrap.bundle.min.js.map

docs/deps/bootstrap-5.1.0/bootstrap.min.css

docs/deps/bootstrap-5.1.0/font.css

docs/deps/bootstrap-5.1.0/fonts/1Ptxg8zYS_SKggPN4iEgvnHyvveLxVs9pbCIPrc.woff

docs/deps/bootstrap-5.1.0/fonts/1Ptxg8zYS_SKggPN4iEgvnHyvveLxVvaorCIPrc.woff

docs/deps/bootstrap-5.1.0/fonts/4iCs6KVjbNBYlgo6ew.woff

docs/deps/bootstrap-5.1.0/fonts/4iCs6KVjbNBYlgoKfw7w.woff

docs/deps/bootstrap-5.1.0/fonts/4iCv6KVjbNBYlgoCxCvTtA.woff

docs/deps/bootstrap-5.1.0/fonts/4iCv6KVjbNBYlgoCxCvjsGyL.woff

docs/deps/bootstrap-5.1.0/fonts/6xK1dSBYKcSV-LCoeQqfX1RYOo3qPZ7nsDQ.woff

docs/deps/bootstrap-5.1.0/fonts/6xK1dSBYKcSV-LCoeQqfX1RYOo3qPa7j.woff

docs/deps/bootstrap-5.1.0/fonts/6xK3dSBYKcSV-LCoeQqfX1RYOo3aPA.woff

docs/deps/bootstrap-5.1.0/fonts/6xK3dSBYKcSV-LCoeQqfX1RYOo3qOK7j.woff

docs/deps/bootstrap-5.1.0/fonts/6xKydSBYKcSV-LCoeQqfX1RYOo3i54rAkw.woff

docs/deps/bootstrap-5.1.0/fonts/6xKydSBYKcSV-LCoeQqfX1RYOo3ig4vAkw.woff

docs/deps/bootstrap-5.1.0/fonts/6xKydSBYKcSV-LCoeQqfX1RYOo3ig4vwlxdo.woff

docs/deps/bootstrap-5.1.0/fonts/6xKydSBYKcSV-LCoeQqfX1RYOo3ik4zAkw.woff

docs/deps/bootstrap-5.1.0/fonts/6xKydSBYKcSV-LCoeQqfX1RYOo3ik4zwlxdo.woff

docs/deps/bootstrap-5.1.0/fonts/CSR54z1Qlv-GDxkbKVQ_dFsvWNRevw.woff

docs/deps/bootstrap-5.1.0/fonts/CSR54z1Qlv-GDxkbKVQ_dFsvaNA.woff

docs/deps/bootstrap-5.1.0/fonts/CSR64z1Qlv-GDxkbKVQ_TOQ.woff

docs/deps/bootstrap-5.1.0/fonts/CSR64z1Qlv-GDxkbKVQ_fOAKSw.woff

docs/deps/bootstrap-5.1.0/fonts/JTURjIg1_i6t8kCHKm45_ZpC7g0.woff

docs/deps/bootstrap-5.1.0/fonts/JTURjIg1_i6t8kCHKm45_dJE7g0.woff

docs/deps/bootstrap-5.1.0/fonts/JTUSjIg1_i6t8kCHKm45xW0.woff

docs/deps/bootstrap-5.1.0/fonts/KFOlCnqEu92Fr1MmEU9fBBc-.woff

docs/deps/bootstrap-5.1.0/fonts/KFOlCnqEu92Fr1MmEU9vAA.woff

docs/deps/bootstrap-5.1.0/fonts/KFOlCnqEu92Fr1MmSU5fBBc-.woff

docs/deps/bootstrap-5.1.0/fonts/KFOlCnqEu92Fr1MmSU5vAA.woff

docs/deps/bootstrap-5.1.0/fonts/KFOlCnqEu92Fr1MmWUlfBBc-.woff

docs/deps/bootstrap-5.1.0/fonts/KFOlCnqEu92Fr1MmWUlvAA.woff

docs/deps/bootstrap-5.1.0/fonts/KFOmCnqEu92Fr1Me5g.woff

docs/deps/bootstrap-5.1.0/fonts/KFOmCnqEu92Fr1Mu4mxM.woff

docs/deps/bootstrap-5.1.0/fonts/QGYpz_kZZAGCONcK2A4bGOj8mNhL.woff

docs/deps/bootstrap-5.1.0/fonts/S6u8w4BMUTPHjxsAXC-s.woff

docs/deps/bootstrap-5.1.0/fonts/S6u8w4BMUTPHjxswWA.woff

docs/deps/bootstrap-5.1.0/fonts/S6u9w4BMUTPHh6UVSwiPHw.woff

docs/deps/bootstrap-5.1.0/fonts/S6u9w4BMUTPHh6UVeww.woff

docs/deps/bootstrap-5.1.0/fonts/S6u9w4BMUTPHh7USSwiPHw.woff

docs/deps/bootstrap-5.1.0/fonts/S6u9w4BMUTPHh7USeww.woff

docs/deps/bootstrap-5.1.0/fonts/S6uyw4BMUTPHjx4wWA.woff

docs/deps/bootstrap-5.1.0/fonts/S6uyw4BMUTPHvxo.woff

docs/deps/bootstrap-5.1.0/fonts/UcCO3FwrK3iLTeHuS_fvQtMwCp50KnMw2boKoduKmMEVuFuYMZs.woff

docs/deps/bootstrap-5.1.0/fonts/UcCO3FwrK3iLTeHuS_fvQtMwCp50KnMw2boKoduKmMEVuI6fMZs.woff

docs/deps/bootstrap-5.1.0/fonts/UcCO3FwrK3iLTeHuS_fvQtMwCp50KnMw2boKoduKmMEVuLyfMZs.woff

docs/deps/bootstrap-5.1.0/fonts/XRXV3I6Li01BKof4MQ.woff

docs/deps/bootstrap-5.1.0/fonts/XRXW3I6Li01BKofA6sKkZQ.woff

docs/deps/bootstrap-5.1.0/fonts/XRXW3I6Li01BKofAjsOkZQ.woff

docs/deps/bootstrap-5.1.0/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk5hkWVAexg.woff

docs/deps/bootstrap-5.1.0/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk5hkaVQ.woff

docs/deps/bootstrap-5.1.0/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk8ZkWVAexg.woff

docs/deps/bootstrap-5.1.0/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk8ZkaVQ.woff

docs/deps/bootstrap-5.1.0/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0RkyFjWVAexg.woff

docs/deps/bootstrap-5.1.0/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0RkyFjaVQ.woff

docs/deps/bootstrap-5.1.0/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsg-1x4gaVQ.woff

docs/deps/bootstrap-5.1.0/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsg-1y4k.woff

docs/deps/bootstrap-5.1.0/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsiH0B4gaVQ.woff

docs/deps/bootstrap-5.1.0/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsiH0C4k.woff

docs/deps/bootstrap-5.1.0/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsjZ0B4gaVQ.woff

docs/deps/bootstrap-5.1.0/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsjZ0C4k.woff

docs/deps/bootstrap-5.1.0/fonts/pe03MImSLYBIv1o4X1M8cc9iB_5p.woff

docs/deps/bootstrap-5.1.0/fonts/pe0qMImSLYBIv1o4X1M8cfe5.woff

docs/deps/bootstrap-5.1.0/fonts/q5uGsou0JOdh94bfvQlr.woff

docs/deps/bootstrap-5.2.2/bootstrap.bundle.min.js

docs/deps/bootstrap-5.2.2/bootstrap.bundle.min.js.map

docs/deps/bootstrap-5.2.2/bootstrap.min.css

docs/deps/bootstrap-5.2.2/font.css

docs/deps/bootstrap-5.2.2/fonts/1Ptxg8zYS_SKggPN4iEgvnHyvveLxVs9pbCIPrc.woff

docs/deps/bootstrap-5.2.2/fonts/1Ptxg8zYS_SKggPN4iEgvnHyvveLxVvaorCIPrc.woff

docs/deps/bootstrap-5.2.2/fonts/4iCs6KVjbNBYlgo6ew.woff

docs/deps/bootstrap-5.2.2/fonts/4iCs6KVjbNBYlgoKfw7w.woff

docs/deps/bootstrap-5.2.2/fonts/4iCv6KVjbNBYlgoCxCvTtA.woff

docs/deps/bootstrap-5.2.2/fonts/4iCv6KVjbNBYlgoCxCvjsGyL.woff

docs/deps/bootstrap-5.2.2/fonts/6xK1dSBYKcSV-LCoeQqfX1RYOo3qPZ7nsDQ.woff

docs/deps/bootstrap-5.2.2/fonts/6xK1dSBYKcSV-LCoeQqfX1RYOo3qPa7j.woff

docs/deps/bootstrap-5.2.2/fonts/6xK3dSBYKcSV-LCoeQqfX1RYOo3aPA.woff

docs/deps/bootstrap-5.2.2/fonts/6xK3dSBYKcSV-LCoeQqfX1RYOo3qOK7j.woff

docs/deps/bootstrap-5.2.2/fonts/6xKydSBYKcSV-LCoeQqfX1RYOo3i54rAkw.woff

docs/deps/bootstrap-5.2.2/fonts/6xKydSBYKcSV-LCoeQqfX1RYOo3ig4vAkw.woff

docs/deps/bootstrap-5.2.2/fonts/6xKydSBYKcSV-LCoeQqfX1RYOo3ig4vwlxdo.woff

docs/deps/bootstrap-5.2.2/fonts/6xKydSBYKcSV-LCoeQqfX1RYOo3ik4zAkw.woff

docs/deps/bootstrap-5.2.2/fonts/6xKydSBYKcSV-LCoeQqfX1RYOo3ik4zwlxdo.woff

docs/deps/bootstrap-5.2.2/fonts/CSR54z1Qlv-GDxkbKVQ_dFsvWNRevw.woff

docs/deps/bootstrap-5.2.2/fonts/CSR54z1Qlv-GDxkbKVQ_dFsvaNA.woff

docs/deps/bootstrap-5.2.2/fonts/CSR64z1Qlv-GDxkbKVQ_TOQ.woff

docs/deps/bootstrap-5.2.2/fonts/CSR64z1Qlv-GDxkbKVQ_fOAKSw.woff

docs/deps/bootstrap-5.2.2/fonts/JTUHjIg1_i6t8kCHKm4532VJOt5-QNFgpCtZ6Ew9.woff

docs/deps/bootstrap-5.2.2/fonts/JTUHjIg1_i6t8kCHKm4532VJOt5-QNFgpCtr6Ew9.woff

docs/deps/bootstrap-5.2.2/fonts/JTUHjIg1_i6t8kCHKm4532VJOt5-QNFgpCuM70w9.woff

docs/deps/bootstrap-5.2.2/fonts/KFOlCnqEu92Fr1MmEU9fBBc-.woff

docs/deps/bootstrap-5.2.2/fonts/KFOlCnqEu92Fr1MmEU9vAA.woff

docs/deps/bootstrap-5.2.2/fonts/KFOlCnqEu92Fr1MmSU5fBBc-.woff

docs/deps/bootstrap-5.2.2/fonts/KFOlCnqEu92Fr1MmSU5vAA.woff

docs/deps/bootstrap-5.2.2/fonts/KFOlCnqEu92Fr1MmWUlfBBc-.woff

docs/deps/bootstrap-5.2.2/fonts/KFOlCnqEu92Fr1MmWUlvAA.woff

docs/deps/bootstrap-5.2.2/fonts/KFOmCnqEu92Fr1Me5g.woff

docs/deps/bootstrap-5.2.2/fonts/KFOmCnqEu92Fr1Mu4mxM.woff

docs/deps/bootstrap-5.2.2/fonts/QGYpz_kZZAGCONcK2A4bGOj8mNhL.woff

docs/deps/bootstrap-5.2.2/fonts/S6u8w4BMUTPHjxsAXC-s.woff

docs/deps/bootstrap-5.2.2/fonts/S6u8w4BMUTPHjxswWA.woff

docs/deps/bootstrap-5.2.2/fonts/S6u9w4BMUTPHh6UVSwiPHw.woff

docs/deps/bootstrap-5.2.2/fonts/S6u9w4BMUTPHh6UVeww.woff

docs/deps/bootstrap-5.2.2/fonts/S6u9w4BMUTPHh7USSwiPHw.woff

docs/deps/bootstrap-5.2.2/fonts/S6u9w4BMUTPHh7USeww.woff

docs/deps/bootstrap-5.2.2/fonts/S6uyw4BMUTPHjx4wWA.woff

docs/deps/bootstrap-5.2.2/fonts/S6uyw4BMUTPHvxo.woff

docs/deps/bootstrap-5.2.2/fonts/UcCO3FwrK3iLTeHuS_fvQtMwCp50KnMw2boKoduKmMEVuFuYMZs.woff

docs/deps/bootstrap-5.2.2/fonts/UcCO3FwrK3iLTeHuS_fvQtMwCp50KnMw2boKoduKmMEVuI6fMZs.woff

docs/deps/bootstrap-5.2.2/fonts/UcCO3FwrK3iLTeHuS_fvQtMwCp50KnMw2boKoduKmMEVuLyfMZs.woff

docs/deps/bootstrap-5.2.2/fonts/XRXI3I6Li01BKofiOc5wtlZ2di8HDFwmRTA.woff

docs/deps/bootstrap-5.2.2/fonts/XRXI3I6Li01BKofiOc5wtlZ2di8HDGUmRTA.woff

docs/deps/bootstrap-5.2.2/fonts/XRXI3I6Li01BKofiOc5wtlZ2di8HDLshRTA.woff

docs/deps/bootstrap-5.2.2/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk5hkWVAexg.woff

docs/deps/bootstrap-5.2.2/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk5hkaVQ.woff

docs/deps/bootstrap-5.2.2/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk8ZkWVAexg.woff

docs/deps/bootstrap-5.2.2/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk8ZkaVQ.woff

docs/deps/bootstrap-5.2.2/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0RkyFjWVAexg.woff

docs/deps/bootstrap-5.2.2/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0RkyFjaVQ.woff

docs/deps/bootstrap-5.2.2/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsg-1x4gaVQ.woff

docs/deps/bootstrap-5.2.2/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsg-1y4k.woff

docs/deps/bootstrap-5.2.2/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsiH0B4gaVQ.woff

docs/deps/bootstrap-5.2.2/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsiH0C4k.woff

docs/deps/bootstrap-5.2.2/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsjZ0B4gaVQ.woff

docs/deps/bootstrap-5.2.2/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsjZ0C4k.woff

docs/deps/bootstrap-5.2.2/fonts/pe03MImSLYBIv1o4X1M8cc9iB_5p.woff

docs/deps/bootstrap-5.2.2/fonts/pe0qMImSLYBIv1o4X1M8cfe5.woff

docs/deps/bootstrap-5.2.2/fonts/q5uGsou0JOdh94bfvQlr.woff

docs/deps/bootstrap-5.3.1/bootstrap.bundle.min.js

docs/deps/bootstrap-5.3.1/bootstrap.bundle.min.js.map

docs/deps/bootstrap-5.3.1/bootstrap.min.css

docs/deps/bootstrap-5.3.1/font.css

docs/deps/bootstrap-5.3.1/fonts/1Ptxg8zYS_SKggPN4iEgvnHyvveLxVs9pbCIPrc.woff

docs/deps/bootstrap-5.3.1/fonts/1Ptxg8zYS_SKggPN4iEgvnHyvveLxVvaorCIPrc.woff

docs/deps/bootstrap-5.3.1/fonts/1adeadb2fe618c5ed46221f15e12b9c8.woff

docs/deps/bootstrap-5.3.1/fonts/4iCs6KVjbNBYlgo6ew.woff

docs/deps/bootstrap-5.3.1/fonts/4iCs6KVjbNBYlgoKfw7w.woff

docs/deps/bootstrap-5.3.1/fonts/4iCv6KVjbNBYlgoCxCvTtA.woff

docs/deps/bootstrap-5.3.1/fonts/4iCv6KVjbNBYlgoCxCvjsGyL.woff

docs/deps/bootstrap-5.3.1/fonts/6xK1dSBYKcSV-LCoeQqfX1RYOo3qPZ7nsDQ.woff

docs/deps/bootstrap-5.3.1/fonts/6xK1dSBYKcSV-LCoeQqfX1RYOo3qPa7j.woff

docs/deps/bootstrap-5.3.1/fonts/6xK3dSBYKcSV-LCoeQqfX1RYOo3aPA.woff

docs/deps/bootstrap-5.3.1/fonts/6xK3dSBYKcSV-LCoeQqfX1RYOo3qOK7j.woff

docs/deps/bootstrap-5.3.1/fonts/6xKydSBYKcSV-LCoeQqfX1RYOo3i54rAkw.woff

docs/deps/bootstrap-5.3.1/fonts/6xKydSBYKcSV-LCoeQqfX1RYOo3ig4vAkw.woff

docs/deps/bootstrap-5.3.1/fonts/6xKydSBYKcSV-LCoeQqfX1RYOo3ig4vwlxdo.woff

docs/deps/bootstrap-5.3.1/fonts/6xKydSBYKcSV-LCoeQqfX1RYOo3ik4zAkw.woff

docs/deps/bootstrap-5.3.1/fonts/6xKydSBYKcSV-LCoeQqfX1RYOo3ik4zwlxdo.woff

docs/deps/bootstrap-5.3.1/fonts/CSR54z1Qlv-GDxkbKVQ_dFsvWNRevw.woff

docs/deps/bootstrap-5.3.1/fonts/CSR54z1Qlv-GDxkbKVQ_dFsvaNA.woff

docs/deps/bootstrap-5.3.1/fonts/CSR64z1Qlv-GDxkbKVQ_TOQ.woff

docs/deps/bootstrap-5.3.1/fonts/CSR64z1Qlv-GDxkbKVQ_fOAKSw.woff

docs/deps/bootstrap-5.3.1/fonts/HI_diYsKILxRpg3hIP6sJ7fM7PqPMcMnZFqUwX28DBKXhM0.woff

docs/deps/bootstrap-5.3.1/fonts/HI_diYsKILxRpg3hIP6sJ7fM7PqPMcMnZFqUwX28DMyQhM0.woff

docs/deps/bootstrap-5.3.1/fonts/HI_jiYsKILxRpg3hIP6sJ7fM7PqlOPHYvDP_W9O7GQTTbI1rSg.woff

docs/deps/bootstrap-5.3.1/fonts/HI_jiYsKILxRpg3hIP6sJ7fM7PqlOPHYvDP_W9O7GQTTsoprSg.woff

docs/deps/bootstrap-5.3.1/fonts/JTUHjIg1_i6t8kCHKm4532VJOt5-QNFgpCtZ6Ew9.woff

docs/deps/bootstrap-5.3.1/fonts/JTUHjIg1_i6t8kCHKm4532VJOt5-QNFgpCtr6Ew9.woff

docs/deps/bootstrap-5.3.1/fonts/JTUHjIg1_i6t8kCHKm4532VJOt5-QNFgpCuM70w9.woff

docs/deps/bootstrap-5.3.1/fonts/KFOlCnqEu92Fr1MmEU9fBBc-.woff

docs/deps/bootstrap-5.3.1/fonts/KFOlCnqEu92Fr1MmEU9vAA.woff

docs/deps/bootstrap-5.3.1/fonts/KFOlCnqEu92Fr1MmSU5fBBc-.woff

docs/deps/bootstrap-5.3.1/fonts/KFOlCnqEu92Fr1MmSU5vAA.woff

docs/deps/bootstrap-5.3.1/fonts/KFOlCnqEu92Fr1MmWUlfBBc-.woff

docs/deps/bootstrap-5.3.1/fonts/KFOlCnqEu92Fr1MmWUlvAA.woff

docs/deps/bootstrap-5.3.1/fonts/KFOmCnqEu92Fr1Me5g.woff

docs/deps/bootstrap-5.3.1/fonts/KFOmCnqEu92Fr1Mu4mxM.woff

docs/deps/bootstrap-5.3.1/fonts/QGYpz_kZZAGCONcK2A4bGOj8mNhL.woff

docs/deps/bootstrap-5.3.1/fonts/S6u8w4BMUTPHjxsAXC-s.woff

docs/deps/bootstrap-5.3.1/fonts/S6u8w4BMUTPHjxswWA.woff

docs/deps/bootstrap-5.3.1/fonts/S6u9w4BMUTPHh6UVSwiPHw.woff

docs/deps/bootstrap-5.3.1/fonts/S6u9w4BMUTPHh6UVeww.woff

docs/deps/bootstrap-5.3.1/fonts/S6u9w4BMUTPHh7USSwiPHw.woff

docs/deps/bootstrap-5.3.1/fonts/S6u9w4BMUTPHh7USeww.woff

docs/deps/bootstrap-5.3.1/fonts/S6uyw4BMUTPHjx4wWA.woff

docs/deps/bootstrap-5.3.1/fonts/S6uyw4BMUTPHvxo.woff

docs/deps/bootstrap-5.3.1/fonts/UcCO3FwrK3iLTeHuS_fvQtMwCp50KnMw2boKoduKmMEVuFuYMZs.woff

docs/deps/bootstrap-5.3.1/fonts/UcCO3FwrK3iLTeHuS_fvQtMwCp50KnMw2boKoduKmMEVuI6fMZs.woff

docs/deps/bootstrap-5.3.1/fonts/UcCO3FwrK3iLTeHuS_fvQtMwCp50KnMw2boKoduKmMEVuLyfMZs.woff

docs/deps/bootstrap-5.3.1/fonts/XRXI3I6Li01BKofiOc5wtlZ2di8HDFwmRTA.woff

docs/deps/bootstrap-5.3.1/fonts/XRXI3I6Li01BKofiOc5wtlZ2di8HDGUmRTA.woff

docs/deps/bootstrap-5.3.1/fonts/XRXI3I6Li01BKofiOc5wtlZ2di8HDLshRTA.woff

docs/deps/bootstrap-5.3.1/fonts/a98f7a7574819ba83bec6279a2cecd95.woff

docs/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk0ZjaVQ.woff

docs/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk5hkWVAexg.woff

docs/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk5hkaVQ.woff

docs/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk8ZkWVAexg.woff

docs/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk8ZkaVQ.woff

docs/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk_RkaVQ.woff

docs/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0RkxhjaVQ.woff

docs/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0RkyFjWVAexg.woff

docs/deps/bootstrap-5.3.1/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0RkyFjaVQ.woff

docs/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsg-1x4gaVQ.woff

docs/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsg-1y4k.woff

docs/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsgH1y4k.woff

docs/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgshZ1y4k.woff

docs/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsiH0B4gaVQ.woff

docs/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsiH0C4k.woff

docs/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsjZ0B4gaVQ.woff

docs/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsjZ0C4k.woff

docs/deps/bootstrap-5.3.1/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsjr0C4k.woff

docs/deps/bootstrap-5.3.1/fonts/q5uGsou0JOdh94bfvQlr.woff

docs/deps/data-deps.txt

docs/deps/jquery-3.6.0/jquery-3.6.0.js

docs/deps/jquery-3.6.0/jquery-3.6.0.min.js

docs/deps/jquery-3.6.0/jquery-3.6.0.min.map

docs/docsearch.css

docs/docsearch.js

docs/favicon-16x16.png

docs/favicon-32x32.png

docs/favicon.ico

docs/index.html

docs/link.svg

docs/logo.png

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/AUC_Bailers_method.html

docs/reference/GUI_log_entry.html

docs/reference/Rplot001.png

docs/reference/apply_sub_file_COV.html

docs/reference/archive_estimation.html

docs/reference/build_system.html

docs/reference/calculate_halflife.html

docs/reference/calculate_objective.html

docs/reference/calculate_objective_ga.html

docs/reference/calculate_objective_pso.html

docs/reference/calculate_variance.html

docs/reference/check_steady_state.html

docs/reference/compare_estimate.html

docs/reference/estimate_parameters.html

docs/reference/fetch_full_parameters.html

docs/reference/figures/logo.png

docs/reference/find_bracketed_arguments.html

docs/reference/generate_parameter.html

docs/reference/generate_report.html

docs/reference/generate_subject.html

docs/reference/gg_axis.html

docs/reference/gg_log10_xaxis.html

docs/reference/gg_log10_yaxis.html

docs/reference/index.html

docs/reference/linspace.html

docs/reference/logspace.html

docs/reference/make_forcing_function.html

docs/reference/md_to_officer.html

docs/reference/md_to_oo.html

docs/reference/nm_select_records.html

docs/reference/pad_string.html

docs/reference/parse_patterns.html

docs/reference/prepare_figure.html

docs/reference/run_simulation_titrate.html

docs/reference/run_simulation_ubiquity.html

docs/reference/sample_around.html

docs/reference/simulate_subjects.html

docs/reference/solution_statistics.html

docs/reference/som_to_df.html

docs/reference/system_check_requirements.html

docs/reference/system_check_steady_state.html

docs/reference/system_clear_cohorts.html

docs/reference/system_define_cohort.html

docs/reference/system_define_cohorts_nm.html

docs/reference/system_estimate_parameters.html

docs/reference/system_fetch_TSsys.html

docs/reference/system_fetch_guess.html

docs/reference/system_fetch_iiv.html

docs/reference/system_fetch_nca.html

docs/reference/system_fetch_nca_columns.html

docs/reference/system_fetch_parameters.html

docs/reference/system_fetch_report.html

docs/reference/system_fetch_report_format.html

docs/reference/system_fetch_rpt_officer_object.html

docs/reference/system_fetch_rpt_onbrand_object.html

docs/reference/system_fetch_set.html

docs/reference/system_fetch_template.html

docs/reference/system_glp_init.html

docs/reference/system_glp_save.html

docs/reference/system_glp_scenario.html

docs/reference/system_load_data.html

docs/reference/system_log_debug_save.html

docs/reference/system_log_entry.html

docs/reference/system_log_init.html

docs/reference/system_nca_parameters_meta.html

docs/reference/system_nca_run.html

docs/reference/system_nca_summary.html

docs/reference/system_new.html

docs/reference/system_new_list.html

docs/reference/system_new_tt_rule.html

docs/reference/system_nm_check_ds.html

docs/reference/system_od_general.html

docs/reference/system_plot_cohorts.html

docs/reference/system_report_doc_add_content.html

docs/reference/system_report_doc_format_section.html

docs/reference/system_report_doc_set_ph.html

docs/reference/system_report_estimation.html

docs/reference/system_report_glp.html

docs/reference/system_report_init.html

docs/reference/system_report_nca.html

docs/reference/system_report_ph_content.html

docs/reference/system_report_save.html

docs/reference/system_report_set.html

docs/reference/system_report_slide_content.html

docs/reference/system_report_slide_section.html

docs/reference/system_report_slide_title.html

docs/reference/system_report_slide_two_col.html

docs/reference/system_report_view_layout.html

docs/reference/system_req.html

docs/reference/system_rpt_add_doc_content.html

docs/reference/system_rpt_add_slide.html

docs/reference/system_rpt_doc_content.html

docs/reference/system_rpt_estimation.html

docs/reference/system_rpt_nca.html

docs/reference/system_rpt_read_template.html

docs/reference/system_rpt_save_report.html

docs/reference/system_rpt_template_details.html

docs/reference/system_select_set.html

docs/reference/system_set_bolus.html

docs/reference/system_set_covariate.html

docs/reference/system_set_guess.html

docs/reference/system_set_iiv.html

docs/reference/system_set_option.html

docs/reference/system_set_parameter.html

docs/reference/system_set_rate.html

docs/reference/system_set_rpt_officer_object.html

docs/reference/system_set_rpt_onbrand_object.html

docs/reference/system_set_tt_bolus.html

docs/reference/system_set_tt_cond.html

docs/reference/system_set_tt_rate.html

docs/reference/system_simulate_estimation_results.html

docs/reference/system_ts_to_simtime.html

docs/reference/system_view.html

docs/reference/system_zero_inputs.html

docs/reference/tic.html

docs/reference/timecourse_stats.html

docs/reference/toc.html

docs/reference/ubiquity_name_check.html

docs/reference/var2string.html

docs/reference/var2string_gen.html

docs/reference/vp.html

docs/reference/workshop_fetch.html

docs/search.json

docs/sitemap.xml

inst/CITATION

inst/ubinc/csv/mab_pk_subjects.csv

inst/ubinc/csv/nm_data.csv

inst/ubinc/csv/pk_all_md.csv

inst/ubinc/csv/pk_all_sd.csv

inst/ubinc/csv/pk_sparse_sd.csv

inst/ubinc/csv/pm_data.csv

inst/ubinc/images/report_image.png

inst/ubinc/perl/build_system.pl

inst/ubinc/scripts/analysis_multiple.r inst/ubinc/scripts/analysis_multiple_file.r inst/ubinc/scripts/analysis_nca_md.R inst/ubinc/scripts/analysis_nca_sd.R inst/ubinc/scripts/analysis_nca_sparse.R inst/ubinc/scripts/analysis_parent.r inst/ubinc/scripts/analysis_parent_metabolite.r inst/ubinc/scripts/analysis_parent_metabolite_global.r inst/ubinc/scripts/analysis_parent_metabolite_nm_data.r inst/ubinc/scripts/analysis_repeat_dosing.r inst/ubinc/scripts/analysis_repeat_infusion.r inst/ubinc/scripts/analysis_single.r inst/ubinc/scripts/analysis_state_reset.r inst/ubinc/scripts/analysis_visit_dosing_titration.r inst/ubinc/scripts/analysis_visit_dosing_titration_stochastic.r inst/ubinc/scripts/analysis_visit_infusion_dosing.r inst/ubinc/scripts/make_report_PowerPoint.R inst/ubinc/scripts/make_report_Word.R inst/ubinc/scripts/nca_generate_data.R inst/ubinc/scripts/ubiquity_fcns.R inst/ubinc/scripts/workshop_test.R

inst/ubinc/systems/system-adapt.txt

inst/ubinc/systems/system-glp_study.txt

inst/ubinc/systems/system-iiv.txt

inst/ubinc/systems/system-mab_pk.txt

inst/ubinc/systems/system-one_cmt_cl.txt

inst/ubinc/systems/system-one_cmt_micro.txt

inst/ubinc/systems/system-pbpk.txt

inst/ubinc/systems/system-pbpk_template.txt

inst/ubinc/systems/system-pwc.txt

inst/ubinc/systems/system-sets.txt

inst/ubinc/systems/system-target.txt

inst/ubinc/systems/system-testing.txt

inst/ubinc/systems/system-tmdd.txt

inst/ubinc/systems/system-tumor.txt

inst/ubinc/systems/system-two_cmt_cl.txt

inst/ubinc/systems/system-two_cmt_micro.txt

inst/ubinc/templates/adapt_parameters.prm

inst/ubinc/templates/adapt_system.for

inst/ubinc/templates/jl_components.jl

inst/ubinc/templates/jl_de.jl

inst/ubinc/templates/monolix.txt

inst/ubinc/templates/mrgsolve.cpp

inst/ubinc/templates/nonmem.ctl

inst/ubinc/templates/r_analysis_estimation.R inst/ubinc/templates/r_components.R inst/ubinc/templates/r_gui_save.R inst/ubinc/templates/r_nca.R inst/ubinc/templates/r_nlmixr.R

inst/ubinc/templates/r_odes.c

inst/ubinc/templates/r_simulation_driver.R inst/ubinc/templates/r_system_report.Rmd inst/ubinc/templates/r_test_rmd.R

inst/ubinc/templates/report.docx

inst/ubinc/templates/report.pptx

inst/ubinc/templates/report.yaml

inst/ubinc/templates/system.svg

inst/ubinc/templates/system_report.R

inst/ubinc/templates/system_template.txt

inst/ubinc/templates/ubiquity_app.R inst/ubinc/templates/ubiquity_app_custom.R inst/ubinc/templates/ubiquity_server.R inst/ubinc/templates/ubiquity_server_custom.R inst/ubinc/templates/ubiquity_ui.R inst/ubinc/templates/ubiquity_ui_custom.R man/AUC_Bailers_method.Rd man/GUI_log_entry.Rd man/apply_sub_file_COV.Rd man/archive_estimation.Rd man/build_system.Rd man/calculate_halflife.Rd man/calculate_objective.Rd man/calculate_objective_ga.Rd man/calculate_objective_pso.Rd man/calculate_variance.Rd man/check_steady_state.Rd man/compare_estimate.Rd man/estimate_parameters.Rd man/fetch_full_parameters.Rd

man/figures/logo.png

man/find_bracketed_arguments.Rd man/generate_parameter.Rd man/generate_report.Rd man/generate_subject.Rd man/gg_axis.Rd man/gg_log10_xaxis.Rd man/gg_log10_yaxis.Rd man/linspace.Rd man/logspace.Rd man/make_forcing_function.Rd man/nm_select_records.Rd man/pad_string.Rd man/parse_patterns.Rd man/prepare_figure.Rd man/run_simulation_titrate.Rd man/run_simulation_ubiquity.Rd man/sample_around.Rd man/simulate_subjects.Rd man/solution_statistics.Rd man/som_to_df.Rd man/system_check_requirements.Rd man/system_check_steady_state.Rd man/system_clear_cohorts.Rd man/system_define_cohort.Rd man/system_define_cohorts_nm.Rd man/system_estimate_parameters.Rd man/system_fetch_TSsys.Rd man/system_fetch_guess.Rd man/system_fetch_iiv.Rd man/system_fetch_nca.Rd man/system_fetch_nca_columns.Rd man/system_fetch_parameters.Rd man/system_fetch_rpt_officer_object.Rd man/system_fetch_rpt_onbrand_object.Rd man/system_fetch_set.Rd man/system_fetch_template.Rd man/system_glp_init.Rd man/system_glp_scenario.Rd man/system_load_data.Rd man/system_log_debug_save.Rd man/system_log_entry.Rd man/system_log_init.Rd man/system_nca_parameters_meta.Rd man/system_nca_run.Rd man/system_nca_summary.Rd man/system_new.Rd man/system_new_list.Rd man/system_new_tt_rule.Rd man/system_nm_check_ds.Rd man/system_od_general.Rd man/system_plot_cohorts.Rd man/system_req.Rd man/system_rpt_add_doc_content.Rd man/system_rpt_add_slide.Rd man/system_rpt_estimation.Rd man/system_rpt_nca.Rd man/system_rpt_read_template.Rd man/system_rpt_save_report.Rd man/system_rpt_template_details.Rd man/system_select_set.Rd man/system_set_bolus.Rd man/system_set_covariate.Rd man/system_set_guess.Rd man/system_set_iiv.Rd man/system_set_option.Rd man/system_set_parameter.Rd man/system_set_rate.Rd man/system_set_rpt_officer_object.Rd man/system_set_rpt_onbrand_object.Rd man/system_set_tt_bolus.Rd man/system_set_tt_cond.Rd man/system_set_tt_rate.Rd man/system_simulate_estimation_results.Rd man/system_ts_to_simtime.Rd man/system_view.Rd man/system_zero_inputs.Rd man/tic.Rd man/timecourse_stats.Rd man/toc.Rd man/ubiquity_name_check.Rd man/var2string.Rd man/var2string_gen.Rd man/vp.Rd man/workshop_fetch.Rd tests/testthat.R tests/testthat/helper-functions.R tests/testthat/test_estimation.R tests/testthat/test_nca_scripts.R tests/testthat/test_new_system_templates.R tests/testthat/test_reporting_scripts.R tests/testthat/test_simulations.R tests/testthat/test_titration.R

ubiquity.Rproj

vignettes/Deployment.Rmd

vignettes/Estimation-parent-op.png

vignettes/Estimation-parent-tc.png

vignettes/Estimation.Rmd vignettes/Language.Rmd vignettes/NCA.Rmd

vignettes/NCA_presim.RData

vignettes/Reporting.RData

vignettes/Reporting.Rmd

vignettes/ShinyApp-ss-Bolus.png

vignettes/ShinyApp-ss-IIV.png

vignettes/ShinyApp-ss-Infusion.png

vignettes/ShinyApp-ss-Initialization.png

vignettes/ShinyApp-ss-Pop_timecourse.png

vignettes/ShinyApp-ss-Save.png

vignettes/Simulation.Rmd

vignettes/Simulation_cfg_orig.RData

vignettes/Simulation_som_multiple.RData

vignettes/Simulation_som_single.RData

vignettes/Titration.Rmd

vignettes/Titration_presim.RData

vignettes/covariates.png

vignettes/dosing_bolus.png

vignettes/myOrg.yaml

vignettes/nca_reporting-md.png

vignettes/nca_reporting-sd.png

vignettes/nca_reporting-sparse.png

vignettes/system-estimation_example.png

vignettes/system-paper-mathematical_sets.png

vignettes/system-paper-parameter_sets.png

vignettes/system-tmdd.png

john-harrold/ubiquity documentation built on March 13, 2024, 2:58 a.m.