compare: Compare a set of genes with the ranking.

In johrpan/geposan: Gene Position Analysis

Compare a set of genes with the ranking.

Description

Compare a set of genes with the ranking.

Usage

compare(ranking, comparison_gene_ids)

Arguments

ranking	A ranking created using ranking().
comparison_gene_ids	IDs of the genes of interest.

Value

A comparison object with the following items:

quantiles

A data.table containing quantile values for the score, rank and percentile of the comparison genes.

mean_score

The mean score of the genes.

mean_rank

The mean rank of the genes.

mean_percentile

The mean percentile of the genes.

test_result

Results of applying a Wilcoxon rank sum test.

johrpan/geposan documentation built on Feb. 28, 2025, 3:48 a.m.