.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
DESCRIPTION
LICENSE
NEWS
R/check_pkg.R
R/db.R
R/dependency.R
R/global.R
R/heaviness.R
R/heaviness_data.R
R/load_pkg.R
R/pkg_db_class.R
R/pkgndep.R
R/plot.R
R/report.R
R/test.R
R/utils.R
R/website.R
R/zzz.R
README.md
_pkgdown.yml
build_pkg_site.R
docs/404.html
docs/LICENSE-text.html
docs/articles/co_heaviness.html
docs/articles/co_heaviness_files/figure-html/unnamed-chunk-4-1.png
docs/articles/co_heaviness_files/figure-html/unnamed-chunk-7-1.png
docs/articles/database.html
docs/articles/index.html
docs/articles/pkgndep.html
docs/articles/pkgndep_files/figure-html/unnamed-chunk-3-1.png
docs/articles/pkgndep_files/figure-html/unnamed-chunk-6-1.png
docs/articles/pkgndep_files/figure-html/unnamed-chunk-7-1.png
docs/articles/pkgndep_files/header-attrs-2.9/header-attrs.js
docs/articles/screenshot.png
docs/articles/suggestions.html
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/files/all_pkgs.rds
docs/files/pkg_db_snapshot.rds
docs/files/pkg_dependency_network_snapshot.rds
docs/files/pkg_dependency_path_snapshot.rds
docs/files/pkg_downstream_dependency_path_snapshot.rds
docs/files/pkg_stat_snapshot.rds
docs/files/pkgndep_db.gif
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/ALL_BIOC_RELEASES.html
docs/reference/Rplot001.png
docs/reference/Rplot002.png
docs/reference/all_pkg_stat_snapshot.html
docs/reference/check_pkg.html
docs/reference/child_dependency.html
docs/reference/co_heaviness-1.png
docs/reference/co_heaviness.html
docs/reference/dependency_database.html
docs/reference/dependency_heatmap.html
docs/reference/dependency_report.html
docs/reference/dependency_website.html
docs/reference/downstream_dependency.html
docs/reference/get_all_functions_imported_to_children.html
docs/reference/gini_index.html
docs/reference/heaviness.html
docs/reference/heaviness_database.html
docs/reference/heaviness_from_upstream.html
docs/reference/heaviness_on_children.html
docs/reference/heaviness_on_downstream.html
docs/reference/heaviness_report.html
docs/reference/html_report.html
docs/reference/index.html
docs/reference/is_parent.html
docs/reference/is_upstream.html
docs/reference/load_all_pkg_dep.html
docs/reference/load_from_heaviness_db.html
docs/reference/load_from_pkgndep_db.html
docs/reference/load_heaviness_timeline.html
docs/reference/load_pkg_db.html
docs/reference/load_pkg_description.html
docs/reference/load_pkg_downstream_dependency_path_snapshot.html
docs/reference/load_pkg_namespace.html
docs/reference/load_pkg_stat_snapshot.html
docs/reference/loaded_packages.html
docs/reference/open_website.html
docs/reference/parent_dependency.html
docs/reference/pkgndep-1.png
docs/reference/pkgndep.html
docs/reference/pkgndep_opt.html
docs/reference/plot.pkgndep.html
docs/reference/print.pkgndep.html
docs/reference/reformat_db.html
docs/reference/required_dependency_packages.html
docs/reference/upstream_dependency.html
docs/sitemap.xml
inst/CITATION
inst/extdata/ComplexHeatmap_dep.rds
inst/extdata/DESeq2_dep.rds
inst/extdata/package_report.html
inst/extdata/update_db/1.download_cran.R
inst/extdata/update_db/2.download_bioc.R
inst/extdata/update_db/3.parse_desc_and_ns.R
inst/extdata/update_db/4.generate_db_by_version.R
inst/extdata/update_db/analysis.R
inst/extdata/update_db/lt_history.R
inst/extdata/update_db/timeline.R
inst/website/app.R
inst/website/dependency_diagram.svg
inst/website/lib.R
inst/website/template/child_dependency.html
inst/website/template/dependency_table.html
inst/website/template/downstream_dependency.html
inst/website/template/error.html
inst/website/template/footer.html
inst/website/template/global_heaviness_analysis.html
inst/website/template/header.html
inst/website/template/heaviness_metrics.html
inst/website/template/package.html
inst/website/template/parent_dependency.html
inst/website/template/timeline.html
inst/website/template/upstream_dependency.html
inst/www/_css/bootstrap.min.css
inst/www/_css/bootstrap.min.css.map
inst/www/_css/images/sort_asc.png
inst/www/_css/images/sort_asc_disabled.png
inst/www/_css/images/sort_both.png
inst/www/_css/images/sort_desc.png
inst/www/_css/images/sort_desc_disabled.png
inst/www/_css/images/ui-icons_444444_256x240.png
inst/www/_css/images/ui-icons_555555_256x240.png
inst/www/_css/images/ui-icons_777620_256x240.png
inst/www/_css/images/ui-icons_777777_256x240.png
inst/www/_css/images/ui-icons_cc0000_256x240.png
inst/www/_css/images/ui-icons_ffffff_256x240.png
inst/www/_css/ion.rangeSlider.min.css
inst/www/_css/jquery-ui.min.css
inst/www/_css/jquery.dataTables.min.css
inst/www/_css/pkgndep.css
inst/www/_css/rSlider.min.css
inst/www/_image/icons8-fitness-64.png
inst/www/_js/bootstrap-typeahead.min.js
inst/www/_js/bootstrap.min.js
inst/www/_js/cytoscape-dagre.js
inst/www/_js/cytoscape-euler.js
inst/www/_js/cytoscape.min.js
inst/www/_js/dagre.min.js
inst/www/_js/ion.rangeSlider.min.js
inst/www/_js/jquery-ui.min.js
inst/www/_js/jquery.min.js
inst/www/_js/pkgndep.js
pkgndep.Rproj
tests/test-all.R
tests/testthat/test_pkgndep.R
vignettes/co_heaviness.Rmd
vignettes/database.Rmd
vignettes/pkgndep.Rmd
vignettes/suggestions.Rmd