# For reading in an individual binary template
# Should not be called directly
# Modified: 2013 JULY 17
readOneBinTemplate <-
function(file) {
lns <- readLines(file)
nr <- length(lns)
n.pt.on <- which(lns == "Points off") - 7
n.pt.off <- which(lns == "Time bin step") - n.pt.on - 9
clip.path <- lns[2]
samp.rate <- as.numeric(lns[4])
pt.on <- NULL
for(i in 1:n.pt.on + 6) {
pt.on <- rbind(pt.on, as.numeric(strsplit(lns[i], ' ')[[1]]))
}
colnames(pt.on) <- c('t', 'frq')
pt.off <- NULL
for(i in 1:n.pt.off + 8 + n.pt.on) {
pt.off <- rbind(pt.off, as.numeric(strsplit(lns[i], ' ')[[1]]))
}
colnames(pt.off) <- c('t', 'frq')
t.step <- as.numeric(lns[n.pt.on + n.pt.off + 10])
frq.step <- as.numeric(lns[n.pt.on + n.pt.off + 12])
n.t.bins <- as.numeric(lns[n.pt.on + n.pt.off + 14])
first.t.bin <- as.numeric(lns[n.pt.on + n.pt.off + 16])
n.frq.bins <- as.numeric(lns[n.pt.on + n.pt.off + 18])
duration <- as.numeric(lns[n.pt.on + n.pt.off + 20])
frq.lim <- as.numeric(strsplit(lns[n.pt.on + n.pt.off + 22], ' ')[[1]])
wl <- as.numeric(lns[n.pt.on + n.pt.off + 24])
ovlp <- as.numeric(lns[n.pt.on + n.pt.off + 26])
wn <- as.character(lns[n.pt.on + n.pt.off + 28])
score.cutoff <- as.numeric(lns[n.pt.on + n.pt.off + 30])
comment <- as.character(lns[n.pt.on + n.pt.off + 32])
template <- new('binTemplate', clip.path = clip.path, samp.rate = as.integer(samp.rate), pt.on = pt.on, pt.off = pt.off, t.step = t.step, frq.step = frq.step, n.t.bins = as.integer(n.t.bins), first.t.bin = first.t.bin, n.frq.bins = as.integer(n.frq.bins), duration = duration, frq.lim = frq.lim, wl = as.integer(wl), ovlp = as.integer(ovlp), wn = wn, score.cutoff = score.cutoff, comment = comment)
return(template)
}
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